Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00397 ATGCGACTACTCCTCTTGCTTCTCCTCCTCCTCCACTTCCACCACACCCTCTCTGCAACTACGCGCATGTCAGAGTACCGTGCGCTGCTCTCTCTCAAGACAGCCATTACTGACGACCCCCAATCTGCTCTTTCCACATGGAACGCCTCAACTAGTCACTGCACCTGGTCCGGCGTCACCTGCGATTCCCGTCGCCACGTTATCGCTCTTAACCTCACCGGTCTCAGCCTCTCCGGTACACTATCCAATGATATTGCTCATCTCCCCCTCCTCTCTAACCTCTCTGTCGCCGATAATCAGTTCTCTGGACCCATTCCCCTCGAGATCTCCACCATCACTGGACTTCGTTTCCTTAACCTTTCTAACAATGTATTCAATGGCACTTTCCCTTCCGAGCTCTCACAGCTCAAGAATCTTCAGGTCCTCGACTTGTATAACAACAACATGACTGGTGACCTCCCACTTGCCGTCACTCTGCTGCCAAATCTACGGCATTTGCATATCGGAGGTAACTTTTTCTCGGGTCAGATCCCACCGGAGTACGGACGATGGCAACATTTGGAATATTTAGGTGTTTCCGGCAACGAGCTGACCGGAAAAATACCGCCGGAGATCGGGAACTTGCCCAGCCTCCGGGAGCTCTATATTGGATACTACAACACTTATGAGAATGGCATTCCACCTGAGATTGGCAACTTGTCGGAATTAGTGAGGCTTGACGCGGCCAACTGTGGATTGACCGGCGAGATACCGCCGGAACTCGGGAAGCTTCAAAAACTAGATACTCTGTTTCTTCAAGTTAATGCGCTTTCAGGGTCTCTGACGCCTGAGCTAGGAAAGCTGAAGAGCCTGAAATCCATGGATTTGTCCAACAATATGTTTGCAGGTGAGATTCCGGAGGCTTTTGCTGAGCTCAAGAACCTGACCCTTCTGAACCTTTTCAGGAATAAGCTTCATGGAGCGATTCCTGAGTTCATTGGTGAGTTGCCAACTCTGGAGGTGCTGCAGCTTTGGGAGAACAACTTCACTGGGAGCATTCCTCAGGGTTTGGGGAAGAATGGGAGATTTGTACTTGTTGATCTTTCTTCAAACAAATTGACTGGGACTCTGCCTCCCAACATGTGCTCTGGGAATCACCTACAGACTTTGATAACTCTGAATAATTTCTTATTTGGTCCTATTCCTGAATCGTTAGGGAGGTGCGAGTCGCTAACTCGGATCCGGATGGGAGAAAACTTTCTGAATGGGTCAATCCCGAAAGGCCTCTTTGGGCTTCCAAAACTTACTCAGGTGGAGCTGCAGGATAATCTTATTTCGGGTCAGTTTCCAGATGCGGATTCGATATCTATTAATCTTGGTCAGGTTAGTCTATCCAATAACCAGCTTTCTGGGCCGTTGCCGCCGACAATTGGTAACTTCTCCGGCATGCAGAAACTCCTTCTTGATGGCAACAAGTTCTCAGGTCAAATCCCTCCTGAGATTGGGAGATTACAGCAACTTTCGAAGATAGATTTTAGCCACAATAAGTTTTCAGGCCCTATTGCGCCAGAAATTAGTCAATGTAAGCTGTTGACGTTCGTTGATCTTAGTCGTAATGAGCTTTCTGGTGAGATTCCGAATAAGATCACTACTATGCGGATATTGAATTACTTGAATCTTTCTAGAAATCATCTAGTTGGTAGCATTCCGGCATCAATATCAAGTATGCAAAGCTTAACTTCTGTTGATTTTTCATATAACAATCTGTCTGGTTTGGTTCCTGGCACTGGCCAGTTCGGCTACTTCAACTACACATCTTTTCTGGGCAACCCTGACCTTTGTGGCCCGTATTTGGGTCCTTGTAAGGATGGGATTGGGAATGGTGCCCACCAACCACACGCTAAAGGTCCCCTCTCAGCTTCTTTGAAGCTCCTTCTGGTTATTGGGTTGCTTCTATGTTCGATTGCATTTGCAGTTGCAGCAATAATTAAAGCACGGTCATTGAAGAAGGCCAGCGAATCTCGTGCATGGAAATTGACTGCATTCCAACGTTTGGACTTCACTGTTGATGATGTTTTGGATTGTTTGAAGGAGGACAACATCATAGGGAAAGGAGGTGCAGATTCTGGAACATCTGAATGCATGTCTGCCATTGCCGGTTCATATGGATACATAGCTCCAGAGTATGCCTACACACTCAAAGTTGATGAGAAAAGTGACGTGTACAGCTTTGGTGTGGTTCTTTTAGAGCTTATCACAGGCAGGAAACCAGTTGGAGAATTTGGTGATGGTGTGGACATTGTGCAATGGGTGAGGAAAATGACGGACTCAAATAAGGAAGGAGTTCTGAAAGTTCTTGATCCTAGGCTTTCCTCAGTTCCCCTTCACGAAGTGATGCATGTCTTTTATGTAGCCATGCTTTGTGTTGAAGAACAGGCTGTAGAGCGACCAACTATGCGTGAAGTTGTTCAAATTCTAACCGAGCTTCCAAAGCCACCAGGTTCAAAACAGGGGGACATAACCATCACGGAGTCCTCTCTATCACCAGCAAACGCTGTAGAAACTCCAACGGTGGCGTCCAAAGAAGTTAAAGATAATCAACATCCTTCTAAATCACCACCTCCTGATCTACTTAGCATTTGAGCTACACTATTGGGGGATGATAGTGTTTCGTCTAAAACTTCCTTGGATTGTGATGCTCTGTCATTCTTATGCTTTGTTCCGTTTTTCTTTTATGGGGTGGGTTTTCTCTAACTTTCAGGTGTTAAGGTTTGATTTTTTTTTTTCTCTTTTAAATTTTGGGTTTTGTACAGTAGGATTGGTGGGGTACTTTCTTATATAGTCTTGTCTTAATCATGTTTAGTACTACTGGTTTTATGGCGTAGCTGCAAGCTGTTGCTGTTCTGAACCCGCACCTGGTAACAGTGTAAGAACGAGGGGAAAATAAAAGGGTGTCAATGACAGGGGGAGTGAAAGGTACACGCGAACGGAGAATGTGTTGTGGTTCATGGATGGTTTTCGCTTTTAGGCCTTTAAAAAATTTGGCAACTTTTGAAAATGTCGTAAAGCTTTAAATTTTTCCTTCAACTTTGAACCCGCCATGACACTGGCAATCCGTATCTTGTGGGCCATGCTGCTTTGAAGGTTGATTGCTACTGGCTTGATGATAATCTTATAAATAAA 3162 0.4551 MRLLLLLLLLLHFHHTLSATTRMSEYRALLSLKTAITDDPQSALSTWNASTSHCTWSGVTCDSRRHVIALNLTGLSLSGTLSNDIAHLPLLSNLSVADNQFSGPIPLEISTITGLRFLNLSNNVFNGTFPSELSQLKNLQVLDLYNNNMTGDLPLAVTLLPNLRHLHIGGNFFSGQIPPEYGRWQHLEYLGVSGNELTGKIPPEIGNLPSLRELYIGYYNTYENGIPPEIGNLSELVRLDAANCGLTGEIPPELGKLQKLDTLFLQVNALSGSLTPELGKLKSLKSMDLSNNMFAGEIPEAFAELKNLTLLNLFRNKLHGAIPEFIGELPTLEVLQLWENNFTGSIPQGLGKNGRFVLVDLSSNKLTGTLPPNMCSGNHLQTLITLNNFLFGPIPESLGRCESLTRIRMGENFLNGSIPKGLFGLPKLTQVELQDNLISGQFPDADSISINLGQVSLSNNQLSGPLPPTIGNFSGMQKLLLDGNKFSGQIPPEIGRLQQLSKIDFSHNKFSGPIAPEISQCKLLTFVDLSRNELSGEIPNKITTMRILNYLNLSRNHLVGSIPASISSMQSLTSVDFSYNNLSGLVPGTGQFGYFNYTSFLGNPDLCGPYLGPCKDGIGNGAHQPHAKGPLSASLKLLLVIGLLLCSIAFAVAAIIKARSLKKASESRAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGADSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLSSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPGSKQGDITITESSLSPANAVETPTVASKEVKDNQHPSKSPPPDLLSI 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00397 873 Gene3D Ribonuclease Inhibitor 178 276 IPR032675 -
Bach4g00397 873 Pfam Protein tyrosine and serine/threonine kinase 715 819 IPR001245 GO:0004672|GO:0006468
Bach4g00397 873 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 704 820 - -
Bach4g00397 873 MobiDBLite consensus disorder prediction 831 856 - -
Bach4g00397 873 Gene3D Ribonuclease Inhibitor 22 177 IPR032675 -
Bach4g00397 873 Gene3D Ribonuclease Inhibitor 354 617 IPR032675 -
Bach4g00397 873 Gene3D Ribonuclease Inhibitor 281 353 IPR032675 -
Bach4g00397 873 SUPERFAMILY RNI-like 70 391 - -
Bach4g00397 873 SMART LRR_typ_2 136 159 IPR003591 -
Bach4g00397 873 SMART LRR_typ_2 497 521 IPR003591 -
Bach4g00397 873 SMART LRR_typ_2 569 592 IPR003591 -
Bach4g00397 873 SMART LRR_typ_2 329 353 IPR003591 -
Bach4g00397 873 SMART LRR_typ_2 160 184 IPR003591 -
Bach4g00397 873 SMART LRR_typ_2 281 304 IPR003591 -
Bach4g00397 873 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 82 325 - -
Bach4g00397 873 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Bach4g00397 873 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 333 618 - -
Bach4g00397 873 Gene3D Transferase(Phosphotransferase) domain 1 681 834 - -
Bach4g00397 873 SUPERFAMILY L domain-like 354 614 - -
Bach4g00397 873 SUPERFAMILY Protein kinase-like (PK-like) 706 826 IPR011009 -
Bach4g00397 873 MobiDBLite consensus disorder prediction 826 873 - -
Bach4g00397 873 Pfam Leucine Rich repeats (2 copies) 137 177 IPR025875 -
Bach4g00397 873 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 19 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00397 Bach-Chr4 2646115 2650125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00397 701 849 Receptor kinase-like Gene Family AT5G65700 84.768 4.03e-75 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bach4g00397 PK_Tyr_Ser-Thr 1.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00397 - - qsa:O6P43_033961 1184.86