Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00395 ATGGAGGATAGCAATATTTTTGATGATGAGTACTACCAGTACCAGTACGAAATGGATTCGCTACTGGCGTACCCGGTAACGGTTGACGAGGTTGATCAGCTGCCGTCATCTTTATCAGGATCTGGGGACAGCTATTCCTCTTTTAAATGTCTCAACTCCAAGCGCAGCGTTGAAAGTCCAGAATCAATAATTGGCCCAAGAGCAACAAAGCAGCTCAAGACCTGTAACACTCAGTCTCACTTGATGCCTAACGCTGCTTCTACTAATTCTTCATCCTCCCAAATTATCTCTTTTGATCACAACAACTCAAATTCATCGTCCGCTGCTAATAATTCTCACCACTTTAACAGCCTCCACTCCACTGTCCACGACAATAAGCGCAAGCCTAAAATCGAGATGGATGCCATTGCCCACGGCCTCTATAATGAAAACCTGGATTTTTCATCTTTCTTTACTCATGACTCTAAAACTCTGCTTAAATATGACACACAAACCACCATTGCGAAAACACCTGCAGTCACCAGAAATCCAGTCCAAGCTCAAGATCACGTAATGGCCGAACGAAAACGAAGGGAAAAACTCACCCAGAGATTCATAGCTCTCTCCGCCATTCTTCCTGGCCTCAAGAAGATGGACAAGGCTTCAGTCCTTGGAGCTGCTATCAAGCATGTGCAAAACCTTCAGGAACGAGTGAAGACTCTGGACGAGCAAGTAACTAAGAAAACTGTGGAATCTGCAGTTTTTGTAAACAGATCTGTTCTCTCTGCCGATGACGGTGATGTTACCTCTTCATCTGACGGAAACTCCGACCAACAACTCCCTGAAATTGAAGCAAGAGTTTCCGGTAAAGACGTGCTCATTATGATTCACTGTGAGAAACACATAGCCTGTGCGCCTACAGTGCTCAGCGAATTACAGAAACTTCATCTCACAGTTCAAAGTAGCAGCTTTCTGCCCTTTGGGACTACAACTATTCACATAACTATTGTTGCTCGGATGGACAAAGAATACTGCACGACAGCCAAGGAGCTTGTAAAAAGCCTAAGGCAGGCTTTGAGGCAGATCATTTAA 1071 0.4454 MEDSNIFDDEYYQYQYEMDSLLAYPVTVDEVDQLPSSLSGSGDSYSSFKCLNSKRSVESPESIIGPRATKQLKTCNTQSHLMPNAASTNSSSSQIISFDHNNSNSSSAANNSHHFNSLHSTVHDNKRKPKIEMDAIAHGLYNENLDFSSFFTHDSKTLLKYDTQTTIAKTPAVTRNPVQAQDHVMAERKRREKLTQRFIALSAILPGLKKMDKASVLGAAIKHVQNLQERVKTLDEQVTKKTVESAVFVNRSVLSADDGDVTSSSDGNSDQQLPEIEARVSGKDVLIMIHCEKHIACAPTVLSELQKLHLTVQSSSFLPFGTTTIHITIVARMDKEYCTTAKELVKSLRQALRQII 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00395 356 PANTHER BHLH TRANSCRIPTION FACTOR 51 353 - -
Bach4g00395 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 183 243 IPR036638 GO:0046983
Bach4g00395 356 Coils Coil 217 244 - -
Bach4g00395 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 227 IPR011598 GO:0046983
Bach4g00395 356 MobiDBLite consensus disorder prediction 102 124 - -
Bach4g00395 356 Pfam Helix-loop-helix DNA-binding domain 181 228 IPR011598 GO:0046983
Bach4g00395 356 Gene3D - 172 242 IPR036638 GO:0046983
Bach4g00395 356 MobiDBLite consensus disorder prediction 102 118 - -
Bach4g00395 356 CDD bHLH_AtNAI1_like 180 252 - -
Bach4g00395 356 SMART finulus 184 233 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00395 Bach-Chr4 2632974 2634432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00395 79 356 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.958 3.30e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach4g00395 HLH 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00395 - - gmx:100785572 274.633