Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00389 ATGGCTGCAGAGATTGGCCTTCTCTCCATAACCCAGATCCAAAAATTATCACAACTCCAACACCATCAAAATCAAAATCAACCTCAACCAAACCCTAACTCTACTACCGCCTCATCATCGTGGATGTGGAACCCTATGGAAAACCAGGAAGATGATGACTCCTGGGAGGTCAGAGCTTTTGCAGAAGACACCAGAAACGTCATGGGTACAACTTGGCCTCCCAGGTCTTACACCTGCACCTTCTGTAGAAGGGAATTCCGTTCAGCTCAAGCTCTTGGCGGCCACATGAACGTGCACCGCCGTGACCGTGCCCGGCTCCACCACCAATCGCAACCGGGTTCAGTCAACATCAACCCCAACTCATCTTCATCATCCTCGTTTATAATCCCAGCTCAAGAGCTTGTTGCAAATAGTGGATTGTGCCTTCTCTACCATTTACCAAACCCTAATGGTACCTTCGGCACTACTGGCAGCAATGTAACTGCATGTGCTGAATCACCATCCACGCTCCTTTCCATTTCACCTTTCCCACCAAACAACTTGATGCAAACTTGCTCTCCTTCCTTTGATTATCCGGTGGCAAGGTCGTCAGGGATCACGTCCTCTTACTGTAATTCAAGCAAAGTCGAGCAACACGCAAGCAGCTCCTCCAACAACAATGGCCACGAAGAGCTTGATCTAGAACTCCGGCTTGGGCACAGACCAGCCCCAACCTGA 717 0.4965 MAAEIGLLSITQIQKLSQLQHHQNQNQPQPNPNSTTASSSWMWNPMENQEDDDSWEVRAFAEDTRNVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHHQSQPGSVNINPNSSSSSSFIIPAQELVANSGLCLLYHLPNPNGTFGTTGSNVTACAESPSTLLSISPFPPNNLMQTCSPSFDYPVARSSGITSSYCNSSKVEQHASSSSNNNGHEELDLELRLGHRPAPT 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00389 238 Gene3D Classic Zinc Finger 67 128 - -
Bach4g00389 238 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Bach4g00389 238 SMART c2h2final6 77 99 IPR013087 -
Bach4g00389 238 SUPERFAMILY beta-beta-alpha zinc fingers 74 104 IPR036236 -
Bach4g00389 238 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
Bach4g00389 238 MobiDBLite consensus disorder prediction 19 47 - -
Bach4g00389 238 PANTHER OS07G0101800 PROTEIN 46 235 - -
Bach4g00389 238 Pfam C2H2-type zinc finger 77 101 - -
Bach4g00389 238 MobiDBLite consensus disorder prediction 19 48 - -
Bach4g00389 238 MobiDBLite consensus disorder prediction 210 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00389 Bach-Chr4 2588255 2588971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00389 38 235 C2H2 Transcription Factor Family AT4G17810 40.278 1.12e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach4g00389 zf-C2H2_6 5e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00389 - - gmx:100818142 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00389 4 2588255 2588971 Bach10g00342 10 2386766 2387440 BWGD
Bach4g00389 4 2588255 2588971 Bach4g00389 4 2588255 2588971 ECH