Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00380 ATGGTAGGGGCATCACTGCCGCCAGGTTTTCGTTTCCACCCAACTGATGAAGAATTGGTGGGATATTACCTGAAAAGAAAGGTTGAGGGGCTCCAGATTGAGCTTGAAGTTATACCCGTGATTGATTTGTACAAGTTCGATCCGTGGGAGTTGCCAGAGAAATCTTTCCTACCAACTCGGGATTTGGAATGGTTTTTCTTCTCTCCACGGGATCGCAAGTACCCAAATGGATCACGAACAAATAGAGCTACCAAAACTGGCTACTGGAAAGCCACCGGAAAAGACAGGAAGATCGTCAGTCAAACTACTCCTTCCACAGTGACGGCCACAGGGTACCGGAAAACACTGGTTTTCTATCGAGGACGAGCCCCTTTAGGGGATCGAACAGAGTGGGTCATGCATGAGTATCGCCTTTGCGATGAACTTGGTGAAGGCTCACCAAGTTTTCAGGGTGGTTTTGCTTTGTGCCGAGTTGTTAAAAAGAATGAGAAGGCAATTGATTCTCAGGGAGAGCATAAAGGCAAAAGGGCTGGAACCAGTTCCACCAATGGGGATCACACTTCAATCAGAATCTCCAACGAGCCTTTGAGCATCTCTTGTGATGTTTCTTCTCAGGCAAGTCACATGAACCATGAGAGTCGTTATTCAAGCCCAATAACTTCTCCATATAATGTGCCACCAGTGACACAGTTTGAGACCAATCCTGCAAACTTCTGGGTCTCCCCTGATTTTATTCTCGATACTTCGAAGGACTTGCCTCAAGTACAACAGTCTGAATACTTTCCGCATTGTGGCCTTTCAAGCTCCTCAACACCATGGCAGTCATTCGAACACACAGAAATTTCACCCAGTTCATCTTACTCAAATTTTAACGGGGAAATGGAATTTGGTGATGATTACAGTCGAATTGGGTGCATGTCACCTTACTCGGGACAAGGAAATTTCATGGACTTTTATGGAAATAAGGATGTGTCTTACGAAGGTTATAACCAAATCAATTCAATCAGATATCCAAAAACTTTCTGAAAAGAAAAGGAAGATCATTGCCCCTCTTTTC 1057 0.4456 MVGASLPPGFRFHPTDEELVGYYLKRKVEGLQIELEVIPVIDLYKFDPWELPEKSFLPTRDLEWFFFSPRDRKYPNGSRTNRATKTGYWKATGKDRKIVSQTTPSTVTATGYRKTLVFYRGRAPLGDRTEWVMHEYRLCDELGEGSPSFQGGFALCRVVKKNEKAIDSQGEHKGKRAGTSSTNGDHTSIRISNEPLSISCDVSSQASHMNHESRYSSPITSPYNVPPVTQFETNPANFWVSPDFILDTSKDLPQVQQSEYFPHCGLSSSSTPWQSFEHTEISPSSSYSNFNGEMEFGDDYSRIGCMSPYSGQGNFMDFYGNKDVSYEGYNQINSIRYPKTF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00380 341 Gene3D NAC domain 15 167 IPR036093 GO:0003677|GO:0006355
Bach4g00380 341 FunFam Nac domain-containing protein 86 15 164 - -
Bach4g00380 341 Pfam No apical meristem (NAM) protein 7 138 IPR003441 GO:0003677|GO:0006355
Bach4g00380 341 ProSiteProfiles NAC domain profile. 6 161 IPR003441 GO:0003677|GO:0006355
Bach4g00380 341 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
Bach4g00380 341 MobiDBLite consensus disorder prediction 166 190 - -
Bach4g00380 341 MobiDBLite consensus disorder prediction 175 190 - -
Bach4g00380 341 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00380 Bach-Chr4 2516706 2518257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00380 1 295 NAC Transcription Factor Family AT4G17980 52.843 7.15e-98 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach4g00380 NAM 3.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00380 - - gmx:100792714 527.324