Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00365 TCTCTCTCTCTCTCTCTCCGTTCTGTTTTCTGTCCATTGAAATAACAAGAGAAAGAATAAAAAACCTGAGAAGACGAGAGGTATTCTCTTGTTCACTCTCTCGGGTTTGAAAAGGAATAATATTTTCCTTAGTTTGAAGACGGAGAGAATTGATTGGATGGTGATTAGCAGATATTGATCTGCGACTTCCTATTGGGGCTGTGAAACGATGCCAAACCAGCTATGGTTTGCACCACCAATGATTTACAGAAATGGAAAGATTTTCCCAAAGGACTACGGGTTCTTCTCCTTGATGGAGACACCAGTTCTGCTGCCGAGATAAGTGCAAAGCTCGAGGCCATGGACTATATCGTTTCTACATTCTGCAATGAGAATGAAGCCTTGTCAGCAATCTCAAGCAGAACAGAAGGATTCCATGTTGCTATAGTGGAGGTGAGTACAAGCAGTAGCCAGGGCAGTTTTAAATTTCTTGAGAATGTCAAGGACTTGCCAACTATTATGACTTCAAGCAATCAATGCCTGAGCACCATGATGAAATGCATAGCGCTTGGTGCAGTTGAGTTCCTAAGCAAACCACTCTCTGAAGACAAGCTTAGGAATATCTGGCAGCATGTCGTTCACAAGGCTTTCAACTCTGGGGCAAGCGTCCTGTCTGATTCACTGAAACCTATCAAAGAATCTGTAGTATCCACGTTGGAGCTTCAAACAGATAATGGACAACATGAAAATGGGATGTCAATAGAGTTAGATAAGGTATCCAGGTCTACTGATAATGATCTGGAGCTGTCTGTAGGAAGTGATAAATTCCCAGCTCCTTCAACCCCACAATTAAAACAGGGAGCAAGGTTACTTGATGATGGGGATTGTCAAGAACAGACTAATTCCTCAACAGAAAAAGAAAATGGGGAGCATGAGCATGAAGGGGAATCCAAATCTGTCGAAACTACAAGTGAGAATTTATATGCTGATGGCACTCTTCCACCAAATAAACCTGAGAAGACTTTGATCAAGGAGGAGGAGGACTTTGTTGATGGTTCTAAGAGGGAAAGTACTGTTTCTCCACATCCACCCAATAGAAAGGTTCTCAGCAACATTGATGGTGGTACTGCATCTCCTAATAAAGCTGGTGTCCCTAGTGTTTCCTGTGATAATAAATCTAATCGGAAGAAAATGAAGGTGGACTGGACACCTGAGTTGCACAAAAAATTTGTGCAAGCAGTGGAACAACTAGGTGTTGATCAAGCCATTCCTTCTAGAATACTGGAACTAATGAAAGTAGAAGACTTGACAAGGCATAATGTAGCAAGCCATCTCCAGAAATATAGAATGCATAAGAGACAAATATTGCCCAAGGAAGAAGATCGAAGATGGCTACATCAAAGGGATCCAATGCAAAGGAGCTATTACCTACAAAGACCTATGATGGCATTTCCACCATATCAGTCTAACCACACCCTATCTCCTGCTCCTGTGTATCCTATGTGGGGACAACCTGGCAGTCATCTACCTGGTGTGCAGATGTGGAACCCGCCTGGTTATCCCGTGTGGCAGCCTACAGAAAGTTGGCACTGGAAGCCTGTTTCAGGGATGCATGCTGATGCGTGGGGTTGCCCTGTGTTGCCTCCTCCTCAAGGTCCTTGTTTTTCCTACTCTCAACAGAATATACCTGGATTTCATAATGCTAATGCAGCTGATTACAGCTCTAGCATGCCACGAAGTACCTTGGAGCCTCATCCGGAAGATGAGGTTATTGACAAGGTAGTGAAGGAGGTAATAAGCAAGCCATGGCTACCCATGCCCTTAGGCCTAAAACCTCCTTCGACTGATGGTGTATTGGCTGAGCTCTCTAGGCAAGGCATATCCAACATCCCTCTTGGCAACAAGGGTAGCTCTAACCGCAGCTGA 1905 0.4404 MVCTTNDLQKWKDFPKGLRVLLLDGDTSSAAEISAKLEAMDYIVSTFCNENEALSAISSRTEGFHVAIVEVSTSSSQGSFKFLENVKDLPTIMTSSNQCLSTMMKCIALGAVEFLSKPLSEDKLRNIWQHVVHKAFNSGASVLSDSLKPIKESVVSTLELQTDNGQHENGMSIELDKVSRSTDNDLELSVGSDKFPAPSTPQLKQGARLLDDGDCQEQTNSSTEKENGEHEHEGESKSVETTSENLYADGTLPPNKPEKTLIKEEEDFVDGSKRESTVSPHPPNRKVLSNIDGGTASPNKAGVPSVSCDNKSNRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEDLTRHNVASHLQKYRMHKRQILPKEEDRRWLHQRDPMQRSYYLQRPMMAFPPYQSNHTLSPAPVYPMWGQPGSHLPGVQMWNPPGYPVWQPTESWHWKPVSGMHADAWGCPVLPPPQGPCFSYSQQNIPGFHNANAADYSSSMPRSTLEPHPEDEVIDKVVKEVISKPWLPMPLGLKPPSTDGVLAELSRQGISNIPLGNKGSSNRS 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00365 560 MobiDBLite consensus disorder prediction 258 274 - -
Bach4g00365 560 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Bach4g00365 560 NCBIfam myb-like DNA-binding domain, SHAQKYF class 316 371 IPR006447 GO:0003677
Bach4g00365 560 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 313 372 IPR017930 -
Bach4g00365 560 Pfam Response regulator receiver domain 20 127 IPR001789 GO:0000160
Bach4g00365 560 SUPERFAMILY CheY-like 16 134 IPR011006 -
Bach4g00365 560 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 550 IPR044825 GO:0003700|GO:0045893
Bach4g00365 560 FunFam Two-component response regulator 312 375 - -
Bach4g00365 560 SUPERFAMILY Homeodomain-like 315 373 IPR009057 -
Bach4g00365 560 Gene3D - 312 374 - -
Bach4g00365 560 SMART REC_2 18 128 IPR001789 GO:0000160
Bach4g00365 560 MobiDBLite consensus disorder prediction 290 310 - -
Bach4g00365 560 Gene3D - 18 140 - -
Bach4g00365 560 MobiDBLite consensus disorder prediction 184 311 - -
Bach4g00365 560 FunFam Two-component response regulator-like APRR2 17 143 - -
Bach4g00365 560 MobiDBLite consensus disorder prediction 159 178 - -
Bach4g00365 560 MobiDBLite consensus disorder prediction 223 239 - -
Bach4g00365 560 Pfam Myb-like DNA-binding domain 319 368 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00365 Bach-Chr4 2423326 2428211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00365 1 550 Response Regulator Gene Family AT4G18020 52.218 1.00e-159 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bach4g00365 Response_reg 9e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00365 - - gmx:100779121 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00365 4 2423326 2428211 Bach10g00320 10 2237081 2241857 BWGD