Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00358 ATGGCTCTCTCTTTTTGGTGTTGGTGCCCTCTGCTTCTTACCTCCCTCCTTTTCATGCAACCTCTTGCAGACACTTCATGTACCGATTGTTTGATTGATTCTCGGGCATCATACTACCCAAATTCTGATGAACAAGGAACTAGTGTTGGCGCATGTGGCTTTGGTTCCTTTGGTGCTACACTGAATGGGGGAGACGTAACAGCCGCATCTAATCTTTATCGGAATGGTGTCGGTTGTGGTGCCTGTTACCAGGTGAGGTGTACCAACAGTGTCTATTGCTCAGACAAAGGGGTGACTGTAGTTATAACGGACCAAGGCTCGGGTCATAACACTGATTTCATTCTGAGCAAACACGCTTTCAAGGGGTTGGCTCAGACGACTGACGCAGCTGCTTATCTGTTAGCTCTTGGCGTAGTTGATGTTGAATACAGGCGCGTTTCATGTAGCTACTCAAACAAAAACATAACATTTAAGATAGACGAGAGCAGCGGCAACCCTCATTACTTGGCTTTTGTCATATGGAATCAACAAGGAAAGAGAGATATCACTGCTGTACAGCTCTGTGAGACTCAGAACTTTGTCTGCAAGCTACTGGATTGGGATCACGGTGCGGTCTGGGCTACTACCTCTCCACCAACCGGACCTTTGTCACTAAGAATGTTGTTCACAGATGATGAGGGAGAAGACACGTGGGTTGTTCCTCCTAATAACATACCCCAAGACTGGAAAGCTGGAGATATATATGACTCAGGAGTACAAGTGACCCAATAG 771 0.4656 MALSFWCWCPLLLTSLLFMQPLADTSCTDCLIDSRASYYPNSDEQGTSVGACGFGSFGATLNGGDVTAASNLYRNGVGCGACYQVRCTNSVYCSDKGVTVVITDQGSGHNTDFILSKHAFKGLAQTTDAAAYLLALGVVDVEYRRVSCSYSNKNITFKIDESSGNPHYLAFVIWNQQGKRDITAVQLCETQNFVCKLLDWDHGAVWATTSPPTGPLSLRMLFTDDEGEDTWVVPPNNIPQDWKAGDIYDSGVQVTQ 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00358 256 SUPERFAMILY Barwin-like endoglucanases 19 152 IPR036908 -
Bach4g00358 256 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 153 IPR007112 -
Bach4g00358 256 PANTHER EXPANSIN-B3 23 253 - -
Bach4g00358 256 SUPERFAMILY PHL pollen allergen 153 250 IPR036749 -
Bach4g00358 256 CDD DPBB_EXLB_N 32 148 - -
Bach4g00358 256 PRINTS Expansin/Lol pI family signature 236 250 IPR007118 GO:0005576
Bach4g00358 256 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Bach4g00358 256 PRINTS Expansin/Lol pI family signature 136 152 IPR007118 GO:0005576
Bach4g00358 256 Pfam Expansin C-terminal domain 155 238 IPR007117 -
Bach4g00358 256 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 167 250 IPR007117 -
Bach4g00358 256 Pfam Lytic transglycolase 69 143 IPR009009 -
Bach4g00358 256 Gene3D - 22 149 IPR036908 -
Bach4g00358 256 Gene3D - 150 254 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00358 Bach-Chr4 2383263 2385072 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00358 11 255 Expansin Gene Family AT4G17030 41.463 1.04e-58 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00358 - - gmx:100794009 423.705