Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00325 ATGGAATTTCGTTCTAAAGAACTACTTGGTCTTGTTGGTATGATTCTGCTCTTACCTGCACTATGTACCTCTCAAGAAGATTTTACTAGTTCTAGAGCAACCTACTTTGGTAGCCCAGATTGCTATGGGAGTCCAAAGGGAGCTTGTGGCTTCGGCGAATATGGAAGGACAGTAAACGATGGAAATGTCGCAGGCGTGTCTAGGCTATGGAAGAATGGAGCTGGTTGTGGTGCTTGCTATCAGGTTAGGTGCAAAATACCAGATCACTGCGACGATGATGGAGCATACATAGTGGTGACAGATTTTGGTGTGGGAGACAACACAGACTTCATCATGAGTCCAAGTGCCTATTCTAAATTGGGATGCAACCCTGATGCTTCTGCAGAGCTCTTCAAATACGGCGTCGTTGATGTAGAATTCAAAAGGGTCCCTTGTAGATACGGTTATAACATCCTCATCAAGGTCCATGAGCACAGCAAAAATCCTAACTACTTGGCCATCGTGGTTCTCAATGTTGGTGGAAGAAACGACATCACTGCTGTTGAGTTGTGGCAGGAGGACTGCCAGCAATGGGTGCGTATGCGGAGAGCGTTTGGAGCTGTGTTCGACTTTGAAAACCCACCAAGAGGTCAAATTAACTTGAGGTTTCAAGTGAATGGCAGGGCAGAGTGGGTGCCCCTCAAAAGGCCTATCCCTAGTGATTGGGAAGCAGGAACTGCTTATGAAACGGAGATGCAGTTTTATTAA 747 0.4618 MEFRSKELLGLVGMILLLPALCTSQEDFTSSRATYFGSPDCYGSPKGACGFGEYGRTVNDGNVAGVSRLWKNGAGCGACYQVRCKIPDHCDDDGAYIVVTDFGVGDNTDFIMSPSAYSKLGCNPDASAELFKYGVVDVEFKRVPCRYGYNILIKVHEHSKNPNYLAIVVLNVGGRNDITAVELWQEDCQQWVRMRRAFGAVFDFENPPRGQINLRFQVNGRAEWVPLKRPIPSDWEAGTAYETEMQFY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00325 248 CDD DPBB_EXLB_N 29 145 - -
Bach4g00325 248 Pfam Expansin C-terminal domain 153 228 IPR007117 -
Bach4g00325 248 Gene3D - 147 248 IPR036749 -
Bach4g00325 248 Gene3D - 19 146 IPR036908 -
Bach4g00325 248 Pfam Lytic transglycolase 63 139 IPR009009 -
Bach4g00325 248 SUPERFAMILY PHL pollen allergen 150 242 IPR036749 -
Bach4g00325 248 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 243 IPR007117 -
Bach4g00325 248 SMART dpbb_1 62 147 IPR007112 -
Bach4g00325 248 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Bach4g00325 248 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Bach4g00325 248 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Bach4g00325 248 PRINTS Expansin/Lol pI family signature 191 205 IPR007118 GO:0005576
Bach4g00325 248 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Bach4g00325 248 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Bach4g00325 248 PANTHER EXPANSIN-B3 18 247 - -
Bach4g00325 248 SUPERFAMILY Barwin-like endoglucanases 16 147 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00325 Bach-Chr4 2099308 2101198 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00325 1 245 Expansin Gene Family AT4G17030 57.430 1.44e-104 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00325 - - ccaj:109800044 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00325 4 2099308 2101198 Bach10g00287 10 2017414 2018605 BWGD