Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00324 ATGGAACTTCATTCTAAAGACCTACTTGGCCTTGTTTGTGTGATTCTGCTCTTACCTGCAGCGTTATGTACTTCTCAGGGCTACTTTACTAGCTCTAGAGCATCCTATTATGGTACCTCAGATGGCTATGGGACTCCAAGTGGAGCTTGTGGCTTCGGCGATTATGGAAGGACAGTCAACGACGGCATGGTCGCCGCCGTGTCTGGGCTATGGCGGAATGGTGCTGGTTGTGGTGCATGCTATCAGGTTAGGTGCAAAATACCACAATACTGTGATGAAGTCGATGGAGCAATCGTGGTGGCGACGGATTATGGCCAGGGAGATAGAACTGACTTCATCATGAGTCGACGTGCCTTCTCAAAATTGGGTTCTGCAAAGCTCTTCAAATACGGTGTCGTTGATGTAGAATTCAAAAGGGTCCCTTGTAAATATGCCTCCAACATCCTCGTCAAGATCCAAGAGCAAAGCAGAAATCCTAACTACTTAGGCATTGTGCTTCTCAATGTTGGTGGAACAAACGACATCACTGCTATTGACTTGTGGCAGGAGGACCACAAAAGATGGATGCCTATGCGCAGGGCGTATGGAGCTGTATTCGACTTTGCTAACCCACCAAGTGGTGAAATTAAATTGAGAATCAAAGTGAATGGCAAGTGGGTGCTGCCCAAAAGGTCTATCCCGTATAATTGGAAGGCTGGAGCTACTTATGAAACCAAGATTCAGTTTTATTAA 732 0.4631 MELHSKDLLGLVCVILLLPAALCTSQGYFTSSRASYYGTSDGYGTPSGACGFGDYGRTVNDGMVAAVSGLWRNGAGCGACYQVRCKIPQYCDEVDGAIVVATDYGQGDRTDFIMSRRAFSKLGSAKLFKYGVVDVEFKRVPCKYASNILVKIQEQSRNPNYLGIVLLNVGGTNDITAIDLWQEDHKRWMPMRRAYGAVFDFANPPSGEIKLRIKVNGKWVLPKRSIPYNWKAGATYETKIQFY 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00324 243 Gene3D - 19 143 IPR036908 -
Bach4g00324 243 Gene3D - 144 243 IPR036749 -
Bach4g00324 243 PANTHER EXPANSIN-B3 18 242 - -
Bach4g00324 243 SUPERFAMILY PHL pollen allergen 147 237 IPR036749 -
Bach4g00324 243 CDD DPBB_EXLB_N 30 142 - -
Bach4g00324 243 SUPERFAMILY Barwin-like endoglucanases 15 146 IPR036908 -
Bach4g00324 243 Pfam Expansin C-terminal domain 150 221 IPR007117 -
Bach4g00324 243 PRINTS Expansin/Lol pI family signature 130 146 IPR007118 GO:0005576
Bach4g00324 243 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Bach4g00324 243 PRINTS Expansin/Lol pI family signature 28 43 IPR007118 GO:0005576
Bach4g00324 243 PRINTS Expansin/Lol pI family signature 224 238 IPR007118 GO:0005576
Bach4g00324 243 PRINTS Expansin/Lol pI family signature 188 202 IPR007118 GO:0005576
Bach4g00324 243 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 147 IPR007112 -
Bach4g00324 243 SMART dpbb_1 64 137 IPR007112 -
Bach4g00324 243 Pfam Lytic transglycolase 68 136 IPR009009 -
Bach4g00324 243 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 160 238 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00324 Bach-Chr4 2096087 2097399 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00324 4 240 Expansin Gene Family AT4G17030 49.798 2.62e-82 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00324 - - gmx:100779487 329.331