Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00323 ATGGAACTTCCAAGGGTTGAAGCTGAGCCTCAACATTATAAGTTCTTAGAAACTTCAATTCCTACTGAGGCTCATGGGCAAACGGATGACTTCTGTCTGAAGAAGGATTGTCCAGTGGTCTCATCCATTCCTGTGGATGGTCCTCCTTTGATAAACAATAAACCTGAAGAAGTGCACTTGGAGGATTTGGAAGCACTGGTGGATACAGGGTTGACAAGAACAGCAGAAGGTATATGTTGTGACTCCTCTGATGTGTCAAAATTCTTCTCACCAGATGTCAATCTATCCCGTTCAAGTGATTGTTTGGGGAAGGCCCTAACTAGAAGTTATCCTCCTCGAAGAAGAGTTTCAGCCAACAGAGACTTCCCTCCTTTATGTGGACGAAACGCCCCTCATCTTGAGAAGGATGAGTGCCTAAGCAACAACTTATCTGTGGAGAACAAGTGTACGGGTAAACAGAATTTGGCTGTAGATGACAGCCCATTGAGAAATATAGTAGCCAATAGCATAAATGAAGTAGAAAAGAATGTTCAAGATGGAGTGGCTTGCAAGGGCAGGCAAGTGGACATTGTTCAAGCTGATTCTGAAGGGAAAGATACAGAGGAAGTGATGAGGCAAGATGTATTTGAACCATCTTCTGAGATGAAATTGCCACTGGAAGATGCAAGAGAAAAATGCATAACAATTCCTAATGAAAGAAATTGCCATCGGGTTGAACTGAATTCTAAGACTGTAGTTGAAGAAGAAAAACAGGATGCCATACAGTTTGAGGGAAATTCAGGGAAGGAGATCATGGTTTACCCAGGAGTCCAAGGTCTTGGAACAAATTCTTCTCATGTATCTGGTTGCTGGAGTGGGTTGAAAAGAGACTTTAATGAACTGCAGGTAGCATCAGACAGGGTGACTGTGTTAGCTCTGATGTCTGAATCAGAATGTCCTTGGAGGCATCGTAGAGGTTCCTCCAAATATGATTTGATTGGTGGTACAAATGAAATCAAGGGAAAGAAAGTAAAATTTTCTCAAAGGGTTGACAAATCTAAATCTGCTATTGAAATTGAAAATTCACCTAATCATTCTAGGGAGAAGACTTTAAAAAAGAAGAAAGGAAGTACTGCTTGTGAAGCTACAGGTCAAATGGTAATTTATGAAAACAAGGATGGTCTCGATCCCAATGAAAACATAGAAGGGTTTCGTGTGGTCCAGAGACAATGTGGTTTCACTATAAATGTTCCTCCCTTTGGTCATGATGAAGCAAAGTTGGGACCTGTCCCTGGTGATAACCCTCGTAGGAGGGTTGATTTTCTGGCAGCTAGAATCCTTAAGGACAAAAATAAATATATTAACACAGGCAAGCAGATATTGGGATCTGTGTCTGGAGTTGAAGTTGGTGATGAATTTCAGTATAGAGTGGAGCTTAATATAATTGGCCTTCATCGCCTGACTCAGGGTGGCATTGATTATGTGAAGCATAATGGTAAGGGTCAGGGGGGAAATGTGATGAACAGTGATAAAGAACCTGAAGATCAAAAGCTCCAACGGGGCAATATGGCTTTGAAAAACAGTAGCGAGGAAAAAAATCCTGTTAGGGTGATACGTGGATCTGACTCAAAGGATGGGAAGTCTAAGAAATATGTTTATGATGGGTTGTATGTAGTTGACAGATATTGGCAGGAAATGGGGCCACATGGTAAGCTGGTTTTCAGATTTCAATTGCATAGAATCCCAGATCAGCCAGAGCTTGCTTGGAAAGAGGTGAAGAAGTCCAAAAAGTTCAAAGTAAGAGAGGGTTTGTGTGTTGATGATATTTCTTTCGGGAAAGAGAAAATGAAAATATGTGCGGTCAACACTGTGGATGATGAAAAACTCCCACCGTTTCAATACACAACTAACATGATATACCCTAATTGGTGCAATCCCATTCCTCCAGAGGGATGTAATTGTACTAATGGCTGCTCTGATTCAGAGAAATGTTCTTGTGCTGTCAAAAATGGTCGGGAGATTCCATTCAATCATAATGGGGCAATTGTAGAAGCAAAACCTCTATCTGATCCACAGTCAAGTTCTCGTGAAGTTGTGGGGGATGGTGGCTTCACCATTGATGCAGCCCAGTATGGTAACGTAGGGAGATTTATCAACCATAGTTGTTCTCCTAATCTTTATGCTCAAAATGTCATTTATGATCATGATAACAACAGGATTCCTCATATAATGCTCTTTGCTGCTGAGAACATTCCTCCCTTGCAAGAACTGATTTATGATTACAACTATATCATAGATCAAGTCCATGATTCTGATGGCAATATAAAGAAGAAGGATTGCTATTGCTGTTCTGCGGAGTGTACTGACGAGGGTATTGGCCAGAAGTTGACAGATTTCAACAAGTACCTCTTTCAGAGGCTAGAGTTGGAAAAGGAGAATGCAATGTATTGTTTTGGAAGTGGACCTCTAAAACTAATGGTTCATATTAATGCCTTGGACAATATCATCTACTTTTTGACTTTGTTGTGA 2508 0.4087 MELPRVEAEPQHYKFLETSIPTEAHGQTDDFCLKKDCPVVSSIPVDGPPLINNKPEEVHLEDLEALVDTGLTRTAEGICCDSSDVSKFFSPDVNLSRSSDCLGKALTRSYPPRRRVSANRDFPPLCGRNAPHLEKDECLSNNLSVENKCTGKQNLAVDDSPLRNIVANSINEVEKNVQDGVACKGRQVDIVQADSEGKDTEEVMRQDVFEPSSEMKLPLEDAREKCITIPNERNCHRVELNSKTVVEEEKQDAIQFEGNSGKEIMVYPGVQGLGTNSSHVSGCWSGLKRDFNELQVASDRVTVLALMSESECPWRHRRGSSKYDLIGGTNEIKGKKVKFSQRVDKSKSAIEIENSPNHSREKTLKKKKGSTACEATGQMVIYENKDGLDPNENIEGFRVVQRQCGFTINVPPFGHDEAKLGPVPGDNPRRRVDFLAARILKDKNKYINTGKQILGSVSGVEVGDEFQYRVELNIIGLHRLTQGGIDYVKHNGKGQGGNVMNSDKEPEDQKLQRGNMALKNSSEEKNPVRVIRGSDSKDGKSKKYVYDGLYVVDRYWQEMGPHGKLVFRFQLHRIPDQPELAWKEVKKSKKFKVREGLCVDDISFGKEKMKICAVNTVDDEKLPPFQYTTNMIYPNWCNPIPPEGCNCTNGCSDSEKCSCAVKNGREIPFNHNGAIVEAKPLSDPQSSSREVVGDGGFTIDAAQYGNVGRFINHSCSPNLYAQNVIYDHDNNRIPHIMLFAAENIPPLQELIYDYNYIIDQVHDSDGNIKKKDCYCCSAECTDEGIGQKLTDFNKYLFQRLELEKENAMYCFGSGPLKLMVHINALDNIIYFLTLL 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00323 835 ProSiteProfiles YDG domain profile. 417 573 IPR003105 -
Bach4g00323 835 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 234 681 - -
Bach4g00323 835 SUPERFAMILY SET domain 589 756 IPR046341 -
Bach4g00323 835 Gene3D SET domain 594 684 IPR046341 -
Bach4g00323 835 Gene3D SET domain 685 783 IPR046341 -
Bach4g00323 835 SMART G9a_1 450 577 IPR003105 -
Bach4g00323 835 Pfam SAD/SRA domain 494 577 IPR003105 -
Bach4g00323 835 SMART preset_2 599 682 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bach4g00323 835 ProSiteProfiles SET domain profile. 595 755 IPR001214 GO:0005515
Bach4g00323 835 Pfam Pre-SET motif 602 677 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bach4g00323 835 Pfam SET domain 682 755 IPR001214 GO:0005515
Bach4g00323 835 SUPERFAMILY PUA domain-like 437 587 IPR015947 -
Bach4g00323 835 Gene3D - 494 593 IPR036987 -
Bach4g00323 835 Gene3D - 436 493 IPR036987 -
Bach4g00323 835 SMART set_7 578 761 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00323 Bach-Chr4 2091247 2094789 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00323 699 780 Su(var)3-9 homologs AT1G73100 40.964 2.17e-14 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bach4g00323 SET 3.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00323 K11420 - qsa:O6P43_024410 615.92