Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00322 ATGGAACTTCATTCTAAAGACCTACTTGGCCTTGTTTGTGTGATTCTGCTCTTACCTGCAGCGTTATGTACTTCTCAGGGCTACTTTACTAGCTCTAGAGCATCCTATTATGGTACCTCAGATGGCTATGGGACTCCAAGTGGAGCTTGTGGCTTTGGCGATTATGGAAGGACAGTCAACGACGGCATGGTCGCCGCCGTGTCTGGGCTATGGCGGAATGGTGCTGGTTGTGGTGCCTGCTATCAGGTTAGGTGCAAAATACCACAATACTGTGATGAAGTCGATGGAGCAATCGTGGTGGCGACGGACTATGGCCAGGGAGATAGAACCGACTTCATCATGAGTCGACGTGCCTTCTCAAAATTGGGACGCAACCCAGACGCTTCTGCAAAGCTCTTCAAATACGGTGTCGTTGATGTAGAATTCAAAAGGGTCCCTTGTAAATATGATTCCAACATCCTCGTCAAGATCCAAGAGCAAAGCAGAAATCCTAACTACTTAGCCATTGTGCTTCTCAATGTTGGTGGAACAAACGACATCACTGCTATTGACTTGTGGCAGGAGGACCACAAAGGATGGATGCCTATGCGCAGGGCGTATGGAGCTGTATTCGACTTTGCTAACCCACCAAGTGGTGAAATTAAATTGAGAATCAAAGTGAATGGCAAGTGGGTGCTGCCCAAAAGGTCTATCCCGGGTAATTGGAAGGCTGGAGCTACTTATGAAACCAAGATTCAGTTTTATTAA 747 0.4712 MELHSKDLLGLVCVILLLPAALCTSQGYFTSSRASYYGTSDGYGTPSGACGFGDYGRTVNDGMVAAVSGLWRNGAGCGACYQVRCKIPQYCDEVDGAIVVATDYGQGDRTDFIMSRRAFSKLGRNPDASAKLFKYGVVDVEFKRVPCKYDSNILVKIQEQSRNPNYLAIVLLNVGGTNDITAIDLWQEDHKGWMPMRRAYGAVFDFANPPSGEIKLRIKVNGKWVLPKRSIPGNWKAGATYETKIQFY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00322 248 SUPERFAMILY PHL pollen allergen 152 242 IPR036749 -
Bach4g00322 248 Gene3D - 19 148 IPR036908 -
Bach4g00322 248 PRINTS Expansin/Lol pI family signature 135 151 IPR007118 GO:0005576
Bach4g00322 248 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Bach4g00322 248 PRINTS Expansin/Lol pI family signature 28 43 IPR007118 GO:0005576
Bach4g00322 248 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Bach4g00322 248 PRINTS Expansin/Lol pI family signature 193 207 IPR007118 GO:0005576
Bach4g00322 248 Pfam Lytic transglycolase 68 141 IPR009009 -
Bach4g00322 248 CDD DPBB_EXLB_N 30 147 - -
Bach4g00322 248 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 152 IPR007112 -
Bach4g00322 248 SMART dpbb_1 64 142 IPR007112 -
Bach4g00322 248 Gene3D - 149 248 IPR036749 -
Bach4g00322 248 PANTHER EXPANSIN-B3 18 247 - -
Bach4g00322 248 SUPERFAMILY Barwin-like endoglucanases 15 151 IPR036908 -
Bach4g00322 248 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 165 243 IPR007117 -
Bach4g00322 248 Pfam Expansin C-terminal domain 155 226 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00322 Bach-Chr4 2078379 2079742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00322 4 245 Expansin Gene Family AT4G17030 50.403 3.80e-84 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00322 - - gmx:100779487 347.051