Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00319 ATGGGCAAACAAGGGCCTTGCTATCACTGTGGAGTTACAAGTACACCACTTTGGCGCAATGGGCCACCAGAGAAGCCAGTATTATGCAATGCATGTGGATCTCGGTGGAGGACAAAGGGAACACTTGCAAATTATACGCCTTTACATGCTCGGGCAGAAACTGATGATTATGAGGATCGAAGGGTTTCTAAGGTGAAGAACGTATCATTAAATAAGAACAAAGAAGTGAAATTGCTCAAGCGAAAGCAGAATTATGATAATGTAGTATATGGAGGGTTTTGTGCTGATTACAACCAGGGATTCCGAAAAGTTATAGATGAAGATGTGAGCAATAGATCAAGTTCTGGATCGGCTATCTCTAACTCAGAGAGCTGTGCTCAATTTGGTGGAACAGATGCTAGTGACTTGACAGGTCCTGCTCAATCAGTTGTCTGGGATACAATGGTGCCTTCAAAAAAGAGGACATGTGTGACTCGTCCTAAGCCATCTTCTGTTGAGAAGCTAACAAAAGATTTATATACTATCCTTCATGAACAACAGTCCTATTTATCTGCCTCTTCTGAAGAGGATCTTCTTTTTGAAAGTGAAACACCAATGGTCTCTGTTGAGATAGGACACGGAAGCGTTCTCATTAGGCACCCTAGCTCTATAGCTCGTGAAGAAGAGTCTGAGGCTAGTTCTCTGTCAGTTGAGAACAAACAATGCCCAACGAATGAGGCTTATTCCTGTTCTGGCGCCATTCCTTTGTATAATAATTGGAATGGTATGAATTTCTCATCTCAAAGATTTGAAAAGATCTGGAACTCTGCTGATCAAGGAATGCAGCAGGAGCAACTTAAAAGGCAAGTGGACAAATCTCAGCATGAAAGAGTACACGTGCTGGGAAATCACAACTCACCACTGTGCTTAATAGATTTAAATGACGTCATAAACTATGAGGAGTTTATGAGACAATTGACAAATGAAGAGCAGCAACAACTACTGAAGTGTCTACCTCTAGTTGATACGGCTAAACTTCCTGATAGGCTTACATTGCATCTGAGGGTGAAACTTGGGAACATATGTTGAGATAAATGCAACATTATGATATCTTGTATTGTTGAATGTGCA 1110 0.4117 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAETDDYEDRRVSKVKNVSLNKNKEVKLLKRKQNYDNVVYGGFCADYNQGFRKVIDEDVSNRSSSGSAISNSESCAQFGGTDASDLTGPAQSVVWDTMVPSKKRTCVTRPKPSSVEKLTKDLYTILHEQQSYLSASSEEDLLFESETPMVSVEIGHGSVLIRHPSSIAREEESEASSLSVENKQCPTNEAYSCSGAIPLYNNWNGMNFSSQRFEKIWNSADQGMQQEQLKRQVDKSQHERVHVLGNHNSPLCLIDLNDVINYEEFMRQLTNEEQQQLLKCLPLVDTAKLPDRLTLHLRVKLGNIC 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00319 355 FunFam GATA transcription factor 27 3 85 - -
Bach4g00319 355 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Bach4g00319 355 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
Bach4g00319 355 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Bach4g00319 355 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
Bach4g00319 355 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Bach4g00319 355 Gene3D - 3 84 IPR013088 GO:0006355|GO:0008270
Bach4g00319 355 Pfam Asx homology domain 282 336 IPR028020 -
Bach4g00319 355 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
Bach4g00319 355 PANTHER OSJNBB0038F03.10 PROTEIN 1 263 IPR044589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00319 Bach-Chr4 2066334 2070663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00319 1 347 C2C2-Gata Transcription Factor Family AT4G17570 60.399 8.39e-127 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach4g00319 ASXH 7.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00319 - - gmx:100798504 535.798