Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00306 GTTCCAATCTTCATTAAACCTCTCTCTGTATTCAATTCTAATTCTCTTGATCCCAAATAACCAAATATAAAACGCAGAAGGAAAGCAGACACTGGATTCACAACATGTACGGGCAGAGTAGCACCGAGTCCGATTTAGCCCTTTTGGAGTCCATTCGGCTGCACTTGCTGGGTGATTCTGATGGTCGATTACCCAATTCGGTTAGCGCTCCGTTTTACTCTCGGAGCTCCAGTTTCAGTAGCTTGTACCCTTGCTTGAGTGATAATTGGGGTGAATTGCCACTCAAAGAGGATGATTTTGAGGACATGGTACTCTACGGTGTACTACGCGATGCTGTTAATGTTGGATGGGTCCCAACCCTTGATGCTGCTTCTCCAGATCCTGATAGCTGCTCATCCGGGTTGACGGCAGTGACGGTTAAATCGGAGCCCGATGTATCGCCGGTGGTACATAGCCCTCCGGAGAGTGTGTTGGCTCCTTCTGTTATTAAACAAGAGAAAACCGTACCAGCGGCTGCACCGGCGAAGGGGAAGCACTACCGAGGCGTGAGGCAACGGCCGTGGGGGAAATTCGCGGCAGAGATCCGTGACCCGGCTAAAAATGGGGCAAGGGTTTGGCTTGGAACATTTGAAACAGCCGAAGACGCCGCGCTGGCTTACGATCGAGCCGCTTACAGGATGAGGGGTTCGCGAGCTCTACTGAATTTCCCGCTCCGGCTAAACTCGGGTGAGCCTGACCCGGTGCGACTAACTTCGAAGAGATCGTCGCCGGAGCCTTCTTCGTCGTCATCGGAGAGTGGGACACCCAAGAGAAGGAAGAAAGGTGTGGGCTCAACGGCTCAAGCCAGATTGAAAACGGGACAAGTGGCAAGTCAAGTGGCATCATGTACACATGGAGGACAGCTATTGGTTAGCTAGATGTACGGGCAGAGTAGCACCGAGTCCGATTTAGCCCTTTTGGAGTCCATTCGGCTGCACTTGCTGGGTGATTCTGATGGTCGATTACCCAATTCGGTTAGCGCTCCGTTTTACTCTCGGAGCTCCAGTTTCAGTAGCTTGTACCCTTGCTTGAGTGATAATTGGGGTGAATTGCCACTCAAAGAGGATGATTTTGAGGACATGGTACTCTACGGTGTACTACGCGATGCTGTTAATGTTGGATGGGTCCCAACCCTTGATGCTGCTTCTCCAGATCCTGATAGCTGCTCATCCGGGTTGACGGCAGTGACGGTTAAATCGGAGCCCGATGTATCGCCGGTGGTACATAGCCCTCCGGAGAGTGTGTTGGCTCCTTCTGTTATTAAACAAGAGAAAACCGTACCAGCGGCTGCACCGGCGAAGGGGAAGCACTACCGAGGCGTGAGGCAACGGCCGTGGGGGAAATTCGCGGCAGAGATCCGTGACCCGGCTAAAAATGGGGCAAGGGTTTGGCTTGGAACATTTGAAACAGCCGAAGACGCCGCGCTGGCTTACGATCGAGCCGCTTACAGGATGAGGGGTTCGCGAGCTCTACTGAATTTCCCGCTCCGGCTAAACTCGGGTGAGCCTGACCCGGTGCGACTAACTTCGAAGAGATCGTCGCCGGAGCCTTCTTCGTCGTCATCGGAGAGTGGGACACCCAAGAGAAGGAAGAAAGGTGTGGGCTCAACGGCTCAAGCCAGATTGAAAACGGGACAAGTGGCAAGTCAAGTGGCATCATGTACACATGGAGGACAGCTATTGGTTAGCTAGTACGTAATGCTGACAGAGACCACAATGCAATGCCCTTCTAAAATCTACTTTTGTAATAATTTTTTGAGAGGATGCGTCTGGGAATTGGCTCGCTCGCTGCCAAACCCAGCTAAGCTCTCCCCTGTCCCAGCAAATTTTGAACTACGCCGACAAATCAGATAAAAGAAGAGAG 1902 0.521 MYGQSSTESDLALLESIRLHLLGDSDGRLPNSVSAPFYSRSSSFSSLYPCLSDNWGELPLKEDDFEDMVLYGVLRDAVNVGWVPTLDAASPDPDSCSSGLTAVTVKSEPDVSPVVHSPPESVLAPSVIKQEKTVPAAAPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRLNSGEPDPVRLTSKRSSPEPSSSSSESGTPKRRKKGVGSTAQARLKTGQVASQVASCTHGGQLLVS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00306 270 SMART rav1_2 144 208 IPR001471 GO:0003700|GO:0006355
Bach4g00306 270 ProSiteProfiles AP2/ERF domain profile. 144 202 IPR001471 GO:0003700|GO:0006355
Bach4g00306 270 SUPERFAMILY DNA-binding domain 144 204 IPR016177 GO:0003677
Bach4g00306 270 Gene3D AP2/ERF domain 143 204 IPR036955 GO:0003700|GO:0006355
Bach4g00306 270 PRINTS Ethylene responsive element binding protein signature 168 184 IPR001471 GO:0003700|GO:0006355
Bach4g00306 270 PRINTS Ethylene responsive element binding protein signature 145 156 IPR001471 GO:0003700|GO:0006355
Bach4g00306 270 FunFam Ethylene-responsive transcription factor 2 143 203 - -
Bach4g00306 270 Pfam AP2 domain 144 194 IPR001471 GO:0003700|GO:0006355
Bach4g00306 270 CDD AP2 143 202 IPR001471 GO:0003700|GO:0006355
Bach4g00306 270 PANTHER DNA-BINDING DOMAIN 122 244 IPR044808 GO:0003700|GO:0009873
Bach4g00306 270 MobiDBLite consensus disorder prediction 205 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00306 Bach-Chr4 1982336 1983424 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00306 1 269 AP2-EREBP Transcription Factor Family AT4G17500 52.632 3.08e-84 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach4g00306 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00306 K09286 - qsa:O6P43_024387 310.842