Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00299 TCTTCCACTTCCTCTTCCGAATTCCGAAATCTTTTTTCTGCCCTGTGACTACAAACTCAATCTTTGAGTTCACTCACAAAGCTTAAGGTTTTCATTTTGATTTTACAAGCATAGATTAGAGATATGATGGTTCAAAAAGAAGATTTGGGGTTGAGTCTGAGCTTGAGCTTCCCTCAGAATCCTCCAAATCCTCTTCACCTCAATCTCCTTTCTTCTTCTACATACTCCTCCTCCTCTCCTTCTGGTTCCAACCTTCAGAAACCCTCTTGGAACGAGGCTTTGACTTCTTCAGATCGAAATTCTGAGACATGCAGAGCCGAAGGTCGTTCTTTCCTCCGAGGAATCGACGTGAATCGGTTGCCTTCGGCGGTCGATTGCGAAGAGGAGGCAGGGGTTTCGTCTCCAAACAGCACGATTTCGAGTGTGAGCGGTAAGAGAAGTGAGAGGGAACCAAACGGAGAAGATCATGAGAATGAGATGGACAGAGCCTGTTCTCGAGGAATCAGCGATGACGAAGACGCCGAAACCTCCAGAAAAAAGCTTAGGCTCTCTAAAGATCAATCTGCTATTCTCGAGGAGAGCTTCAAAGAGCACAACACCCTGAACCCCCAGAAGCAGAAGTTGGCGTTGGCAAAGCAGCTGGGCCTTCGACCAAGACAAGTAGAGGTGTGGTTCCAGAACCGAAGGGCAAGGACTAAGCTTAAGCAAACTGAAGTGGACTGTGAGTTCTTGAAAAGGTGTTGCGAGAATTTGACGGAGGAGAACAGACGGTTGCAGAAGGAAGTTCAGGAGCTGAGAGCGCTGAAACTTTCCCCACAATTCTACATGCAGATGACTCCACCCACCACCCTCACCATGTGCCCTGCATGTGAGCGCGTTGCTGTTCCGCCCTCTGCGGTGGAAGCTGGCCGCCACCATCCCATGGCCCAAGCTCACCCTCGGCCCATTCCCATCGGCCCGTGGGCCACAGCAGCTCCCATTCCTCACAGGCCTTTTGATGCACTCCGTCATAGATCCTGAGAGTAGAGTGCATGTTGGTCTTTTTGGTTGCATCTCAGAAAGCCTTGTTAGAGCCGTGTAATGCAAGGCAAACGGAAAAATAGGAAAAAAGGTTGTACTGTTCGGGGGTATTTAAGGGATAATGAATATTTTATGTTGAAAGTCCAGTCTAAGATATGGTGGTTAGGGAAGGTGATTTTGGTGGGTCTTCATTGTTTTGTACTAATTTGACCCATCGAGTCTTGTTTTCTTTTGGGGGATATGCTCTTCTATTAGTTTAGGTTTTTAGTTTCTCTAATAGTTACTTTCCCCCCAAATCTAAACACTAAACAGACTTTTTATGTAAAGTCAAATTGGCTAAATTAAGTTATAATTACCTCCGTGTTCC 1387 0.4658 MMVQKEDLGLSLSLSFPQNPPNPLHLNLLSSSTYSSSSPSGSNLQKPSWNEALTSSDRNSETCRAEGRSFLRGIDVNRLPSAVDCEEEAGVSSPNSTISSVSGKRSEREPNGEDHENEMDRACSRGISDDEDAETSRKKLRLSKDQSAILEESFKEHNTLNPQKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPACERVAVPPSAVEAGRHHPMAQAHPRPIPIGPWATAAPIPHRPFDALRHRS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00299 298 SMART HOX_1 135 198 IPR001356 GO:0003677
Bach4g00299 298 MobiDBLite consensus disorder prediction 1 61 - -
Bach4g00299 298 MobiDBLite consensus disorder prediction 11 60 - -
Bach4g00299 298 PRINTS Lambda-repressor HTH signature 174 190 IPR000047 GO:0003677
Bach4g00299 298 PRINTS Lambda-repressor HTH signature 165 174 IPR000047 GO:0003677
Bach4g00299 298 Gene3D - 141 192 - -
Bach4g00299 298 SMART halz 194 237 IPR003106 GO:0006355|GO:0043565
Bach4g00299 298 SUPERFAMILY Homeodomain-like 127 195 IPR009057 -
Bach4g00299 298 Pfam Homeobox associated leucine zipper 194 228 IPR003106 GO:0006355|GO:0043565
Bach4g00299 298 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 51 260 - -
Bach4g00299 298 MobiDBLite consensus disorder prediction 85 141 - -
Bach4g00299 298 Pfam Homeodomain 137 192 IPR001356 GO:0003677
Bach4g00299 298 CDD homeodomain 137 195 IPR001356 GO:0003677
Bach4g00299 298 ProSitePatterns 'Homeobox' domain signature. 169 192 IPR017970 GO:0000981|GO:0006355
Bach4g00299 298 MobiDBLite consensus disorder prediction 90 105 - -
Bach4g00299 298 ProSiteProfiles 'Homeobox' domain profile. 133 194 IPR001356 GO:0003677
Bach4g00299 298 Pfam HD-ZIP protein N terminus 2 109 IPR006712 GO:0005634
Bach4g00299 298 Coils Coil 193 230 - -
Bach4g00299 298 MobiDBLite consensus disorder prediction 106 141 - -
Bach4g00299 298 FunFam Homeobox-leucine zipper protein HAT22 141 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00299 Bach-Chr4 1943891 1945924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00299 1 298 Homeobox Transcription Factor Family AT4G16780 63.907 2.19e-113 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach4g00299 HD-ZIP_N 8.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00299 K09338 - gmx:100813367 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00299 4 1943891 1945924 Bach10g00266 10 1885917 1887487 BWGD