Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00275 ATGGAGAAGCACAAATGCAAGCTTTGCTCTAGGACATTCGCCAATGGCAGAGCATTAGGTGGCCACATGAAGGCTCATTTGGCCACTCTTCCCCTTCCTCCAAAGCCCGAACCACTCGGTGACTCCGCTTTATTTTCATATTCTTCTTCCGAAGAAGTAGAAGAAGAAGCACTTGGATACGGAGAGCCAGAGCAAAAGGCCTTGAATTATGGGTTGAGGGAGAATCCCAAGAGAAGTCTCAGACTTGCAGATCCTGAGTTTTCTTTTGCTGTTGATAATGGGTCTGTCGTCTTAGATAGAGAGAGCGAGACCGAGTCAAAGAACCCAACTCGGCGGCGATCCAAGAGAAACCGGAAATCCAGCACTGCAGGGAGCCAAACCCGGAATCAGGACGAGAATTTGGAACCGAAGAAGCCTAAACCGAGTTTTCCAGAGTCACCGACGGAGCCTGAACCGGCGAGCTCGGTTTCTGATACTTCCCCCGAAGAAGATGTTGCTATGTGCCTCATGATGCTCTCAAGGGACAGATGGATGAGAAATATTGTAAAAGAAGATCAAGACGAGGAAGAACAAGAGCTGAGATCAGTAGAGGAATCAAAGGGATTGGAAGAGATCAAGTTGAAGAGAGTTCGCGGGAAGCACCAGTGTGACAAATGTAGAAAAACGTTTCGATCTTCTCGCGCCTTAGACAGTCACAAAAACATCTGCTTACTTGATGAAGCGCAAGTCCAATGTGCAGGTAATGATAAAATTTTTGAATGCCCGTATTGTCACAAGATATTTGGGTCAGGACAGGCACTTGGTGGTCACAAGAGATCTCATCTCTTGGCATCTTCATCATCAAATGTTAAAGATTCTGGTAGATTAAGAGGGGCCATAATAGATCTCAACTTGCCAGCTCCAGCAGAAGATGAACTTAGTGTGGTTTCTGATGCATAA 939 0.4622 MEKHKCKLCSRTFANGRALGGHMKAHLATLPLPPKPEPLGDSALFSYSSSEEVEEEALGYGEPEQKALNYGLRENPKRSLRLADPEFSFAVDNGSVVLDRESETESKNPTRRRSKRNRKSSTAGSQTRNQDENLEPKKPKPSFPESPTEPEPASSVSDTSPEEDVAMCLMMLSRDRWMRNIVKEDQDEEEQELRSVEESKGLEEIKLKRVRGKHQCDKCRKTFRSSRALDSHKNICLLDEAQVQCAGNDKIFECPYCHKIFGSGQALGGHKRSHLLASSSSNVKDSGRLRGAIIDLNLPAPAEDELSVVSDA 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00275 312 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 312 IPR044303 GO:0006355
Bach4g00275 312 MobiDBLite consensus disorder prediction 99 163 - -
Bach4g00275 312 SUPERFAMILY beta-beta-alpha zinc fingers 3 29 IPR036236 -
Bach4g00275 312 ProSitePatterns Zinc finger C2H2 type domain signature. 6 26 IPR013087 -
Bach4g00275 312 Gene3D Classic Zinc Finger 211 274 - -
Bach4g00275 312 ProSitePatterns Zinc finger C2H2 type domain signature. 254 274 IPR013087 -
Bach4g00275 312 MobiDBLite consensus disorder prediction 39 64 - -
Bach4g00275 312 Coils Coil 179 199 - -
Bach4g00275 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 252 274 IPR013087 -
Bach4g00275 312 SMART c2h2final6 214 234 IPR013087 -
Bach4g00275 312 SMART c2h2final6 252 274 IPR013087 -
Bach4g00275 312 SMART c2h2final6 4 26 IPR013087 -
Bach4g00275 312 Pfam C2H2-type zinc finger 252 274 - -
Bach4g00275 312 Pfam C2H2-type zinc finger 4 28 - -
Bach4g00275 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 4 31 IPR013087 -
Bach4g00275 312 SUPERFAMILY beta-beta-alpha zinc fingers 214 274 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00275 Bach-Chr4 1793365 1794303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00275 2 305 C2H2 Transcription Factor Family AT1G02030 37.805 2.22e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach4g00275 zf-C2H2_6 3.9e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00275 - - qsa:O6P43_034089 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00275 4 1793365 1794303 Bach10g00244 10 1724216 1725160 BWGD