Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00255 ATGGATTCCAAGCATGGTTCTCCTGTTATCACTGACCCTGTTCCCATCGGCAAGTCTAGACTAGGAATCCGTTCTGGTCTCTTAACTTACTCCCAGCAAGATCAGCCAGTGTCTCCCAGTAAGTATACAAGAAGCGGTTCAAGGAAAAGTGGAGGTAGTCTTGATGATGTTCGCTCCAATGGATGGTTGGATGCCATGAAGGCTTCCTCACCACCAAGGAAGAAGCTTCTTAAAGGTTCTAACGTTCAGATTGCTTCCATAGACTGTGAAACTGAAGATTATCTATCCTGGATGCTTGATTATCCATCAGCACTCGATTGCTTTGACAAAATTATTGACCGCGCTAAGCATAACAAGATTGCAATGTTCCTAGATTACGATGGCACTCTCTCACCAATTGTAGACAATCCAGATTGTGCTTTTATGTCAGAATCTATGCGGGCAACAGTGAGAAGTGTGGCAAAGTATTTTCCTACCGCAATCATTAGCGGAAGAAACCGTGACAAGGTTTTTGATTTAGTTAAACTAACTGAACTGTACTATGCTGGGAGCCATGGTATGGACATTATTGGCCCTGCCAGTGATTCTCTTTCTAAGGTCCATCCGGATTGTGTTAAATCTACTGACGATCAGGGAAAGGAAATAACTCTCTTTCAACCTGCAAGAGAATTTCTCTCTATGATCGACCAGGTTTTTAAAACCCTGGTCGAGATTACCAGAGATATCAAAGGCGCAAAAGTTGAAAATCACAGGTTTTGCGTTTCTGTACATTACCGTAATGTAGAAGAGAATAATTGGACAACTGTTGGACAATGTGTCCATGATGTGGTAAAAGATTACCCTCGTTTACGTTTAACTCACGGACGGAAGGTTTTAGAAATCCGTCCTGTGATTGATTGGAATAAAGGAAAAGCAGTTGAATTCTTACTAGAATCTCTAGGATTAACTGACAGGGATAGTGTGCTTCCCATCTACATTGGGGATGATAAGACTGACGAAGATGCATTTAAGGTGCTGCGTGACAGCCAACGAGGTTTTGGGATTTTAGTTTCGTCAGTGAGGAAAGAAAGCAGTGCCGTCTACTCTCTCCGTGACCCAAATGAGGTCATGAAATTTCTACAACTCTTAGTGAATTGGAAGAGGCAAGAAGCAAGGACGCAGGATGAACTTAGAGTTTAG 1179 0.4241 MDSKHGSPVITDPVPIGKSRLGIRSGLLTYSQQDQPVSPSKYTRSGSRKSGGSLDDVRSNGWLDAMKASSPPRKKLLKGSNVQIASIDCETEDYLSWMLDYPSALDCFDKIIDRAKHNKIAMFLDYDGTLSPIVDNPDCAFMSESMRATVRSVAKYFPTAIISGRNRDKVFDLVKLTELYYAGSHGMDIIGPASDSLSKVHPDCVKSTDDQGKEITLFQPAREFLSMIDQVFKTLVEITRDIKGAKVENHRFCVSVHYRNVEENNWTTVGQCVHDVVKDYPRLRLTHGRKVLEIRPVIDWNKGKAVEFLLESLGLTDRDSVLPIYIGDDKTDEDAFKVLRDSQRGFGILVSSVRKESSAVYSLRDPNEVMKFLQLLVNWKRQEARTQDELRV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00255 392 Gene3D - 120 209 IPR023214 -
Bach4g00255 392 Gene3D - 218 391 IPR023214 -
Bach4g00255 392 FunFam Trehalose 6-phosphate phosphatase 227 386 - -
Bach4g00255 392 MobiDBLite consensus disorder prediction 32 54 - -
Bach4g00255 392 NCBIfam trehalose-phosphatase 119 377 IPR003337 GO:0003824|GO:0005992
Bach4g00255 392 MobiDBLite consensus disorder prediction 32 58 - -
Bach4g00255 392 NCBIfam HAD-IIB family hydrolase 122 341 IPR006379 -
Bach4g00255 392 CDD HAD_TPP 121 371 - -
Bach4g00255 392 FunFam Trehalose 6-phosphate phosphatase 221 297 - -
Bach4g00255 392 Pfam Trehalose-phosphatase 123 366 IPR003337 GO:0003824|GO:0005992
Bach4g00255 392 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 30 386 IPR044651 GO:0004805|GO:0005992
Bach4g00255 392 SUPERFAMILY HAD-like 121 381 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00255 Bach-Chr4 1643806 1645990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00255 116 376 Trehalose Biosynthesis Gene Families AT1G70290 25.714 1.70e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00255 K01087 - qsa:O6P43_024315 577.015