Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00251 ATGTCATCCTCTTCTACTACCTTATCGCTGGACCACCTCCCCTCTTCCGAGCAGCTTTGTTATGTCCACTGCAATATTTGTGACACCGTGCTCGCTGTAAGCGTTCCTTGCACAAGCTTGTTCAAAACTGTGACTGTCCGATGCGGCCATTGCACCAATCTCCTGCCAGTGAACATGCGTGGATTACTTCTGCCATCGACAAATCAATTTCACCTGAGTCACTCTTTATTCTCTCCATCCCATAACCTTCTGGAGGAGATTCCAATTTCATCCCCAAATTTCTTTATCAACCAGACCACGTCTTCCAATGACTTCTCTATGCCTACCAGGACTGCAGTTGATGAGCTTCCTCGGCCACCGGTCATAAACAGACAGAAGAGACAAAGAGTCCCCTCCGCGTACAACCGCTTCATTAAGGACGAGATCCAACGCATCAAGTCTGCCAATCCTGATATAACCCACAGAGAAGCCTTCAGCGCAGCTGCCAAGAATTGGGCCCACTTCCCACACATCCACTTTGGCCTCATGCCTGATCAGACAGTGAAGAAGACGAATGTGCGCCAGCAGGTAATTAAGTTATCATGCGCCCACTTCTCTTTGATATCTGACTTTATGTGCTTGCACCTTAATTATCTTTCTGTTCAGGAAGCAGGGGACGTTCTAATGAAAGATGGGATTTTTGCTTCGGCTAATGTTGGTGTTTCTCCCTACTAA 714 0.4734 MSSSSTTLSLDHLPSSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHLSHSLFSPSHNLLEEIPISSPNFFINQTTSSNDFSMPTRTAVDELPRPPVINRQKRQRVPSAYNRFIKDEIQRIKSANPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNVRQQVIKLSCAHFSLISDFMCLHLNYLSVQEAGDVLMKDGIFASANVGVSPY 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00251 237 CDD HMG-box_SF 129 165 - -
Bach4g00251 237 SUPERFAMILY HMG-box 119 168 IPR036910 -
Bach4g00251 237 PANTHER PROTEIN YABBY 6-RELATED 1 186 IPR006780 GO:0007275
Bach4g00251 237 Gene3D High mobility group box domain 122 172 IPR036910 -
Bach4g00251 237 Pfam YABBY protein 15 175 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00251 Bach-Chr4 1617202 1619516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00251 26 235 C2C2-YABBY Transcription Factor Family AT4G00180 48.511 3.87e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bach4g00251 YABBY 5.4e-67 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00251 K25796 - vvi:100267708 346.665