Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00249 ATGAATACGTTATCACATGTTCCTCCAGGCTTCCGGTTCCATCCCACTGATGAAGAACTTGTTGATTACTACCTTAGGAAAAAGGTAGCTTGTAAAAGGATTGATCTCGATGTTATCAAAGATGTCGATCTCTATAAAATTGAGCCATGGGATCTTCAAGAATTGTGCAAAATTGGCAGTGAAGAACAAAATGATTGGTATTTCTTTAGCCATAAAGATAAGAAGTACCCAACTGGAACTCGCACCAATAGAGCTACAAAAGCAGGATTTTGGAAAGCTACAGGAAGAGACAAGGCCATCTATGCTAGGCATTGCCTTATTGGCATGAGAAAGACTTTGGTGTTTTACCAAGGGCGAGCTCCAAATGGACAAAAATCTGACTGGATTATGCATGAATATCGGCTAGAAACAAATGAAAATGCAACTCCTCAGGAAGAAGGCTGGGTTGTATGTAGAGTGTTCAAGAAGCGGATGACAACAGTTCGGAAAATGGGAGAGTATGAGTCACCCTGTTGGTATGATGACCAAGTTTCCTTCATGCAAGATCTTGAATCCCCAAGGCGAATTTCTAACTCTTATGCATCATACCAACAACACTACCCCTGCAAGCAGGAGCTGGAATTCCAATACAACATACCCCAGGATGCCTTCCTCCAACTTCCTCAGCTAGAAAGCCCTAAAGTTCCTCAATCAGCCATAAGTTTGAGTTGCAACTCAGTTATCCCATATGGGTATGATAGGAACACCAATGGCAGCACCCTGCAGTCCTCATCACTCACGCAAGAAGAACACATGCAACACTGCCATCAACAAAGTCTGAACTCTCTTCATGGTAGTATCGATCAAGCAGGGGATCAGGTGACTGATTGGCGAGTGCTTGACAAATATGTTGCTTCTCAGCTCAGTCATGACCAAGATGCTTCCAAGGAAAACAGCTATTCTTCAAATGCAGCTGTCCTCATGAATGTGGCTCAGCAAATTACTATTCTAGCAAATGAATCCAAAAGGCCTGAGGAATATGCCTCAACATCCGCCTCCAGTTGCCAAATTGACTTGTGGCAGTGA 1065 0.4319 MNTLSHVPPGFRFHPTDEELVDYYLRKKVACKRIDLDVIKDVDLYKIEPWDLQELCKIGSEEQNDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYARHCLIGMRKTLVFYQGRAPNGQKSDWIMHEYRLETNENATPQEEGWVVCRVFKKRMTTVRKMGEYESPCWYDDQVSFMQDLESPRRISNSYASYQQHYPCKQELEFQYNIPQDAFLQLPQLESPKVPQSAISLSCNSVIPYGYDRNTNGSTLQSSSLTQEEHMQHCHQQSLNSLHGSIDQAGDQVTDWRVLDKYVASQLSHDQDASKENSYSSNAAVLMNVAQQITILANESKRPEEYASTSASSCQIDLWQ 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00249 354 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 298 - -
Bach4g00249 354 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Bach4g00249 354 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Bach4g00249 354 MobiDBLite consensus disorder prediction 334 354 - -
Bach4g00249 354 FunFam NAC domain-containing protein 16 160 - -
Bach4g00249 354 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Bach4g00249 354 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00249 Bach-Chr4 1597871 1599508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00249 1 354 NAC Transcription Factor Family AT1G12260 55.784 1.26e-141 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach4g00249 NAM 2.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00249 - - tcc:18606319 623.239