Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00213 ATGCCCATTGTTTCGAGCATGAGAAGACTCCGTCAATTCCTTCTCTCACATGCTCTGCTCTGCTCTATCCTTTGTTTTATTTCATTCATAACAGTCTCATCGGCTGCTGAGAAGGAGATTTTGCTACAATTTAAGGGTAACATTACAGATGATCCCTACAACAGTTTGCGTTCATGGGCTTTAAGTGGAAACCCTTGCGAAGATTACGAGGGTGTTTCCTGTAACTCGGAAGGATTTGTGGAAAGAATTGTTCTATGGAACACTAGCTTAGCGGGAGTATTGTCTCCGGCCCTGTCGGGGTTGAAATCGTTGAGGATTTTGACATTGTTCGGGAACCGCTTTTCGGGTCATATCCCTCAAGAATATTCTGACATACACACATTGTGGAAGATCAATTTGAGTACCAATGCGTTATCTGGTTCAATTCCCGACTTCATTGGCAATTTGCCGAGCATCCGCTTTCTAGATTTGTCAAGGAATGGCTTCAATGGGGAGATACCATCAGCTTTGTTTAGGTACTGTTATAAAACCAAGTTCGTTGCTTTCTCTCATAACAGTCTTTCAGGTTCAATTCCAGCATCGTTGGTGAATTGCTCCAACCTTGAAGGTTTTGATTTTTCTTTCAACAATCTTAGTGGGGGTATTCCATCTCGAATTTGTGACATTCCAAGGTTATCATATATAATCTTGAGAAGCAGTGGCTTATCAGGAAGTGTGCAAGAGCAGATTCCGGCTTGCCAAAGTTTGAAACGTCTCGACCTTGGTAATAATATGTTCACTGGTTCGGCCCCATTCAGCACCCTTGAAATGCAAAATCTTACTTATTTCAATGTATCTTATAATGGATTTAGTGGACAGATTCCTGAAACGACAACCTGTAGTGAGACATTAGAAGTTTTTGATGCTTCAGGGAATGATTTGGATGGGAATATTCCCTCGAGCTTAACAAAATGCAAAAAACTAAAGCTATTATCTTTGGAGTTTAATCGGCTGAATGGGATTATTCCGGAAAGGATTCAGGATTTGGAAAGGTTGTTAGTTATTAAACTGGGTAATAATTCAATAGGTGGGACGATTCCAGAGGGGTTTGGCAACATTGAGCTACTTGAAGTTCTAGATCTGCACAATCTAAACCTTGTTGGTGAAATTCCCAATAATATAAGCAATTGCAGGTTTCTTCTTGAGTTGGATATTTCTGGTAATAACTTAGAGGGAGAAATTCCTCAGACCCTTTACAACATGACGACCCTGAAAGTCCTTGACCTTCATCAAAACCAGCTTAATGGAAGCATCCCACCAAACCTAGGAAACCTGTCAAAGCTCCAATCCTTAGATTTGTCACATAATTCGCTCTCTGGCTCAATCCCTTATTCGCTTGGAGATTTGAAAAACTTGACACATTTTAATCTGTCATTTAACAATCTCTCAGGCCCAATTCCCCTTCTTCAGACCATTCAGGGTTTTGGTTCATCTGCATTTTCAAACAATCCGTTTCTTTGTGGCGCTCCTTTGGATACACCTTGCTCAGCAAAAGGCACATCACCTTCCGTTTCTGGTAAAACGAAACTGCTAAGTGTCTCTGCAATTGTTGCAATTGTTGCTGCAGCTGTAATTCTTACTGGCGTTTGTTTGGTGACCATCATGAATATTAAGGCTCGTAGTCGGAAAAAAGATGATCAGGTAATGATTATTGAGAGCACACCTCTTGGGTCAACGGAATCAAATGTTATAATTGGGAAGTTGGTTCTTTTCAGCAAAAGTTTACCGTCAAAGTATGAAGATTGGGAGGCAGGTACCAAAGCATTGCTCGACAAGGAATCTCTGATAGGCAGTGGATCAATTGGTACAATTTACAGAACTAATTTTGAAGGTGGGATCTCAATTGCAGTGAAAAAGCTCGAGACTTTGGGAAGGATCAGAAACCAGGATGAATTTGAGCACGAAATTGGGCGACTAGGCAACCTTCAACACCCTAATTTAGTTGCCTTTCAAGGTTATTATTGGTCACCGACAATGCAGTTGATTCTATCAGAGTTTGTCTCAAATGGGAATTTATATGATAATCTACATGGGATAGGTTATCCAGGAACTAGCACTAGTAATGGCAATAAGGAGTTATGTTGGTCTAGAAGGTTCCGAATTGCAGTTGGAACCGCAAGAGCTCTTGCTTATCTTCACCATGATTGTCGACCTCCAATTCTTCATCTCAACATTAAATCATCTAATATACTCTTAGATGAAAAGTACGAAGCTAAGTTGTCTGATTATGGATTAGGAAAATTACTGCCTATTCTGGACAATTATGGTCTGACCAAATTCCACAATGCCGTAGGGTATGTTGCACCAGAGTTGGCTCAAAGTTTGAGACAGAGTGAGAAATGTGATGTTTATAGTTTTGGGGTCATTCTTTTAGAGCTGGTTACAGGGAGGAAGCCTGTAGAGAGTTCAACAACAAATGATGTGGTGGTTTTGTGTGAATATGTTAGAGGACTGTTGGAGATTGGCTCTGCTTCAGATTGCTTTGATAGAAGTTTACTGGGTTGTGCAGAGAACGAATTGATTCAGGTTATGAGATTGGGATTGATTTGTACTTCAGAGGATCCTGCAAGGAGACCTAGCATGGCTGAGGTTGTCCAGGTCCTTGAATCTATCAGAAATGGATTGGAATCACATCAATCAGTTAGTGCTTTTCCATAA 2697 0.4064 MPIVSSMRRLRQFLLSHALLCSILCFISFITVSSAAEKEILLQFKGNITDDPYNSLRSWALSGNPCEDYEGVSCNSEGFVERIVLWNTSLAGVLSPALSGLKSLRILTLFGNRFSGHIPQEYSDIHTLWKINLSTNALSGSIPDFIGNLPSIRFLDLSRNGFNGEIPSALFRYCYKTKFVAFSHNSLSGSIPASLVNCSNLEGFDFSFNNLSGGIPSRICDIPRLSYIILRSSGLSGSVQEQIPACQSLKRLDLGNNMFTGSAPFSTLEMQNLTYFNVSYNGFSGQIPETTTCSETLEVFDASGNDLDGNIPSSLTKCKKLKLLSLEFNRLNGIIPERIQDLERLLVIKLGNNSIGGTIPEGFGNIELLEVLDLHNLNLVGEIPNNISNCRFLLELDISGNNLEGEIPQTLYNMTTLKVLDLHQNQLNGSIPPNLGNLSKLQSLDLSHNSLSGSIPYSLGDLKNLTHFNLSFNNLSGPIPLLQTIQGFGSSAFSNNPFLCGAPLDTPCSAKGTSPSVSGKTKLLSVSAIVAIVAAAVILTGVCLVTIMNIKARSRKKDDQVMIIESTPLGSTESNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESLIGSGSIGTIYRTNFEGGISIAVKKLETLGRIRNQDEFEHEIGRLGNLQHPNLVAFQGYYWSPTMQLILSEFVSNGNLYDNLHGIGYPGTSTSNGNKELCWSRRFRIAVGTARALAYLHHDCRPPILHLNIKSSNILLDEKYEAKLSDYGLGKLLPILDNYGLTKFHNAVGYVAPELAQSLRQSEKCDVYSFGVILLELVTGRKPVESSTTNDVVVLCEYVRGLLEIGSASDCFDRSLLGCAENELIQVMRLGLICTSEDPARRPSMAEVVQVLESIRNGLESHQSVSAFP 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00213 898 SMART LRR_typ_2 462 495 IPR003591 -
Bach4g00213 898 SMART LRR_typ_2 149 173 IPR003591 -
Bach4g00213 898 SMART LRR_typ_2 414 437 IPR003591 -
Bach4g00213 898 SMART LRR_typ_2 342 365 IPR003591 -
Bach4g00213 898 SMART LRR_typ_2 438 461 IPR003591 -
Bach4g00213 898 Gene3D Ribonuclease Inhibitor 34 178 IPR032675 -
Bach4g00213 898 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 34 172 - -
Bach4g00213 898 Pfam Leucine Rich repeats (2 copies) 440 478 IPR025875 -
Bach4g00213 898 SUPERFAMILY Protein kinase-like (PK-like) 604 882 IPR011009 -
Bach4g00213 898 Pfam Leucine rich repeat 320 378 IPR001611 GO:0005515
Bach4g00213 898 Gene3D Transferase(Phosphotransferase) domain 1 681 896 - -
Bach4g00213 898 Gene3D Ribonuclease Inhibitor 179 511 IPR032675 -
Bach4g00213 898 PRINTS Leucine-rich repeat signature 438 451 - -
Bach4g00213 898 PRINTS Leucine-rich repeat signature 393 406 - -
Bach4g00213 898 FunFam Putative LRR receptor-like serine/threonine-protein kinase 580 679 - -
Bach4g00213 898 ProSiteProfiles Leucine-rich repeat profile. 440 463 IPR001611 GO:0005515
Bach4g00213 898 ProSiteProfiles Protein kinase domain profile. 603 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00213 898 SUPERFAMILY L domain-like 54 235 - -
Bach4g00213 898 CDD STKc_IRAK 609 884 - -
Bach4g00213 898 Pfam Leucine Rich repeat 389 406 IPR001611 GO:0005515
Bach4g00213 898 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 173 511 - -
Bach4g00213 898 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Bach4g00213 898 PANTHER OS05G0588300 PROTEIN 219 340 - -
Bach4g00213 898 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 680 890 - -
Bach4g00213 898 Gene3D Phosphorylase Kinase; domain 1 584 680 - -
Bach4g00213 898 Pfam Protein kinase domain 605 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach4g00213 898 SUPERFAMILY L domain-like 174 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00213 Bach-Chr4 1379190 1381975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00213 13 890 Receptor kinase-like Gene Family AT1G62950 64.350 0.0 1115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Bach4g00213 Pkinase 2.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00213 - - qsa:O6P43_034163 1417.52