Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00193 TTTGCTTTCCTCCCTCACAGAAGAAAACAAAACTAAACTTGAATACCTCTCTCTCTCTCTCTCACACCCACAGACACAGACACGCACATAAATCGTTTTAATGCTTTCGCTTCTTCCTCTTTCTCTGTGTATGTAAAATCTTTGTTTCTATCAGACGTGCTGCAGAAAGTTGTGTGTCTCGGATCCCTATATACAAAGCCTTTCTCTTTTTCTCTCTCGTTAGCTCCCTCTCTGTCTTACACCTAAACCGATACCACCGTCTTGAATCAGTAATCTCCATCTCTCTCTTCTTTGCTCAATAGTCAATACGGCTTTTGCTGTGCTGCCTTAGACTTTTAGAGTGGTCCTCAACCACAAGTTCAGCTTTTTCCCTATATAATTCATTCTATTCTCTGCTTTTTCGTTTACAGCATTCACAGTGATTCGAAGCTTGGAAAGAAATGCAAGAACCAAGCTTGGGAATGATGGGTGGTGGTGGTAGTTTAAGCGGAGATTTATCAGGCTCCGGCGATCACCACCGACAACTGAAAGCAGAGATAGCGACTCATCCACTCTATGAGCAGCTTCTAGCAGCCCATATCTCTTGTCTCCGCGTTGCCACTCCCATCGATCAGCTTCCACTCATCGATGCCCAGTTGTCTCAATCCCACAATCTTCTACGCTCTTATGCCTCCCACCATACCCATTCCCTTTCACCTCATGACCGCCAAGACCTCGACAATTTCCTGGCACAATATCTGATAGTGCTGTGTACTTTCAAAGAACAGCTTCAGCAACATGTCAGAGTCCATGCCGTCGAGGCTGTCATGGCCTGCCGTGATATTGAAAATACCTTACAAGCTCTAACAGGAGTAAGCTTGGGAGAAGGAACTGGTGCAACAATGTCAGATGATGAAGATGATTTGCAGATGGATTTCTCTTTAGATCAGGGTGGCTCCGAAGGGCACGACATGATGGGGTTTGGTCCATTAATGCCTACAGAATCTGAAAGGTCACTGATGGAAAGAGTTCGTCAAGAACTAAAGATTGAGCTGAAGCAGGGTTTTAAATCAAAAATTGAAGATGTAAGGGAGGAAATATTAAGGAAACGAAGAGCTGGGAAATTACCAGGCGACACAACTTCGGTTTTGAAAACTTGGTGGCAGCAACATTCAAAGTGGCCCTACCCAACTGAAGATGACAAAGCAAAACTTGTGGAGGAGACAGGGTTGCAGCTGAAGCAAATCAATAATTGGTTCATCAATCAAAGGAAGCGCAATTGGCACAGCAGCTCTCAATCAGTTACCTCTTTAAAGTCCAAGCGTAAGAGGTAGACAAATTTGACCCCCTCCTGTTGAGTAACAGCAACCAGCTATTATGCACTTACTTTATGCTGATAGGAGACGACTGAGGAGATACGGGATATAAACATATATGGTCTAATTAAGATCGCTTAAGAAGCTGAGTTAGCTAGCTTGTAAATTTGTGGATTTTAACGAATGCATTAACTTTCTGCTAGATCCATCC 1506 0.4363 MQEPSLGMMGGGGSLSGDLSGSGDHHRQLKAEIATHPLYEQLLAAHISCLRVATPIDQLPLIDAQLSQSHNLLRSYASHHTHSLSPHDRQDLDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGTGATMSDDEDDLQMDFSLDQGGSEGHDMMGFGPLMPTESERSLMERVRQELKIELKQGFKSKIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSSSQSVTSLKSKRKR 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00193 290 SMART HOX_1 215 280 IPR001356 GO:0003677
Bach4g00193 290 SUPERFAMILY Homeodomain-like 215 279 IPR009057 -
Bach4g00193 290 ProSiteProfiles 'Homeobox' domain profile. 213 276 IPR001356 GO:0003677
Bach4g00193 290 Gene3D - 212 286 - -
Bach4g00193 290 Pfam KNOX2 domain 85 136 IPR005541 GO:0003677|GO:0005634
Bach4g00193 290 Pfam KNOX1 domain 29 70 IPR005540 GO:0003677|GO:0005634
Bach4g00193 290 FunFam homeobox protein knotted-1-like 3 isoform X1 214 275 - -
Bach4g00193 290 SMART KNOX2_2 82 137 IPR005541 GO:0003677|GO:0005634
Bach4g00193 290 SMART KNOX1_2 27 71 IPR005540 GO:0003677|GO:0005634
Bach4g00193 290 ProSiteProfiles ELK domain profile. 193 213 IPR005539 GO:0003677
Bach4g00193 290 Pfam Homeobox KN domain 233 272 IPR008422 GO:0003677|GO:0006355
Bach4g00193 290 CDD homeodomain 216 277 IPR001356 GO:0003677
Bach4g00193 290 MobiDBLite consensus disorder prediction 1 23 - -
Bach4g00193 290 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 70 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00193 Bach-Chr4 1284437 1288487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00193 1 289 Homeobox Transcription Factor Family AT1G62990 78.425 1.80e-171 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Bach4g00193 KNOX2 1.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00193 - - gmx:100782179 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00177 10 1241187 1245690 Bach4g00193 4 1284437 1288487 BWGD
Bach4g00193 4 1284437 1288487 Bach4g00193 4 1284437 1288487 ECH