Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00170 GCTCCCTCCGTCCTCGCTTGCTCCGTTGCGGGAGAAAGCTAGCTCGCAACTGGCGTTGTTGGTGATTTCTCGTTCAACTGAAGAGCGTACAACTGGGTCTCTTGTTTTCGCTCATACGAGTTGAGAAAATTCCAGGACTCAAATCAATATTGCAGGATAGCCCATCCCGTCTTTTCAAGAGCTAGATGTAATTGTCAAAAAATATAGCAAAGGCGCTACAAATTACCGGAGTTTGGAGCGAAGGATATCGATGAAAGTAGAACAAGGTTGAATTTCCAGATCTGGAAGCTAAGTGGATGGCGCCATTCCCGGTTGAGCAGACTGGTGAATCAGCACCACCAATAGAGTCGCAGAGATCTATACCGACGCCGTTTCTCACGAAAACTTACCAACTTGTGGATGATCCATCTGTAGAGGACCTAATTTCATGGAACGAAGATGGTAGCAGTTTCATAGTCTGGCGACCAGCTGAGTTTGCTCGAGATTTGCTTCCTAAATATTTTAAGCACAACAATTTTTCCAGTTTCGTCCGTCAACTTAACACCTATGGGTTTCGGAAGGTTGTCCCGGACCGGTGGGAATTTGCAAACGATTGTTTCCGACGAGGAGAGAGAGGACTGCTTCGAGACATACAGCGGCGGAAAATATCACCGTCGGCAGGTGGTGGGACGACCGCTGTAGCTGGTTCAGTAGTTAATTCAGTGACGGTGGCTACTGTGGCGAGACCGGGACCAGTGTCTCCAACCAACTCGGGCGAAGAACAGGTGATCTCGTCAAACTCATCTCCGATTGCTGTACATAATACAATGCACCGCACCACAAGTTGCACCAGTGCGCCCGAGCTATTCGAAGAGAATGAGAGGCTTAAAAAAGAAAACATGCAACTGTGTCACGAATTAAGTCAATTGAAGGGACTGTGTAATAACATACTCGCTTTGATGACCAATTATGCTTCTAGCCAATTAGAGTCTACTACCCCTAATGTGCCTGAAGCAGAAGGGAAACCCCTGGAGATTTTACCAGCGAACCAACCTTCAGCTGAGCAAGCCGTTGGCGGAGGTGGGAGTGGCAGTGTTAGTTTGTGTGAGACGGAAGCAGAGGTTGAGGTGCCGAAGTTGTTTGGGGTTTCAATTGGATTTAAACGATGTAGGCGACAGGGGGATGCAGAGAAAGAAGAACAAAGCCAACCACAGTCGTCGCAGTCGCAGGAGAATGATCCTGGATCAGATGTGAAATCCGAGCCATTGGACGTTGATGGCAACAACTCGGATGATCAGGAGACTCCCTGGCTAGAGCTTGGCAAATAATGGAATGCTAATTTTTAATCTGGACTTGGAGGGAGGTGGGTGGATGTTGCTTCGTGACTGAACCAGTATACGGCATAGAGAGGGAAAGAGGATCTAACTTGTCAAAGGACGAGCACGTGACTCCAAAATAAATTAAGAAGGTACCTGTTGCTTTTTGAACCAACTTGTGCAGCGTAAAATGTGAGAATGACTAGGCAAAGTTGCAAAAGAAAGAAAGTAAGTGGTGTTGAATTGATGGAACCGGTTACTGGTTAGAACTTAGATTTGAATCAAGTGTTTTGCCTGAAAACAGGACGAAATAAATTAAGCGAAGGTGAGAACTCGCAAATGGACAATGCAGTGCCCCTACGATACAACAATTCACAATCACAAACGCGTAATTATCTCAAACCAGTCTCATAGTTTCTCTTCGGAGTCCCAATCCTGGTAGGATATCTTTTCTTGTCTGCGTGGAATCTGGTCTTGATCTATCCATGTATTATGGAAAGTTTTACAACTAATATAGAATCATCTTTGTCATATGGATTTTATAAAGTAATTTAAACACAAAC 1858 0.4532 MAPFPVEQTGESAPPIESQRSIPTPFLTKTYQLVDDPSVEDLISWNEDGSSFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGERGLLRDIQRRKISPSAGGGTTAVAGSVVNSVTVATVARPGPVSPTNSGEEQVISSNSSPIAVHNTMHRTTSCTSAPELFEENERLKKENMQLCHELSQLKGLCNNILALMTNYASSQLESTTPNVPEAEGKPLEILPANQPSAEQAVGGGGSGSVSLCETEAEVEVPKLFGVSIGFKRCRRQGDAEKEEQSQPQSSQSQENDPGSDVKSEPLDVDGNNSDDQETPWLELGK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00170 336 Gene3D - 18 116 IPR036388 -
Bach4g00170 336 MobiDBLite consensus disorder prediction 294 310 - -
Bach4g00170 336 SMART hsfneu3 22 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00170 336 MobiDBLite consensus disorder prediction 1 20 - -
Bach4g00170 336 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00170 336 PRINTS Heat shock factor (HSF) domain signature 26 49 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00170 336 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00170 336 ProSitePatterns HSF-type DNA-binding domain signature. 65 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00170 336 SUPERFAMILY "Winged helix" DNA-binding domain 23 115 IPR036390 -
Bach4g00170 336 MobiDBLite consensus disorder prediction 286 336 - -
Bach4g00170 336 Pfam HSF-type DNA-binding 26 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach4g00170 336 Coils Coil 187 207 - -
Bach4g00170 336 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 19 304 IPR027725 -
Bach4g00170 336 FunFam Heat stress transcription factor B-4 18 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00170 Bach-Chr4 1130830 1133073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00170 17 336 HSF AT4G11660 52.994 8.88e-104 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bach4g00170 HSF_DNA-bind 3.4e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00170 K09419 - qsa:O6P43_034210 420.239