Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00161 ATGTACTCATCTATCCTCTCAGAACGCCCTAGGACAATATCGAAACTTCTGTGTAGCTTCATCTTGGCGCGAAACATGGGCGGGGGTCCTCGCACCTTCCCTGGCGGTGTCAACAAGTGGAAATGGAAGCGCATGCATGAGAAGCGAGCAAGAGATAAAGAGAGAAGGCTTCTTGAACAAGAAAATCAAATATACCAGGCTCGAATTCGATCGCATATTCGGGCACAACTCGCCGGAAAACCAGACTCTGGAAGCACAAGTCATGGTCCATTGACCCCGGAGGACCACATAAAGGCTTTAGCGAACAGATTTATGAAGGAAGGAGCTGAAGATCTATGGAACAGAAATGACGGTCCGTTAAAGTCTACGCTCCCGTTTTCCAAAGAACTTCCACCAACGGATCGATCGAACAGACGCTCAGGTTCTATTGGATCGCCGGTAGATTTGAGAAAACTAATACCGGAAGGCCGTAACGTGGTTTCTAATAATGAAATCGGAAATTTGACTAATTTCAATGGTAACTATGTGCATACTAGGAATTACTCAGTGCAAAGTCAAAGGAAATTTGGGAGGAATGACAGCTCCTCGGCCGAGGATGTTTCCAATTCTGGTTTGAAGGGAAACTCTGCAAGGTTCACCGTTAGAAATTTTGTAAATAATCCGAGAAACATGAATAACACAAGTGTGGATGATTACATAAATAATAAGAAAGTTATGCCAAAAAGGCGGCGGAAATTTTGGAGGAATGAGAGTTCTTCCAGTGAGAGTGAATCAGATTGGGATGCGGAGGGTGAACCTAGGAACTATTCATGGGGCCGCAGGTTGAATTTTGCTGGAGAAGAAGTATCGGGAAATGATGAGGATTTAAGAATTGGGTGGGATGTAACGAAGATGGGTAGTAATGCTTCTTTGGGGAAGTATGATATCAAGTCCAAGAGGAGGATGCCGCCTACGTTATATGACGAGGAGAATGATCTTTCAGAACAAGTTGAGTTGATCAGGGATCAACTTAGTAAGAGGAAGTTGGCCCAGAACGAGGAGCAGAAAACCGAGGGAGATATGATGCTTAGTCAGAGAAGATTTGATGAGTGTGGTATATCACCATTGACAGTCAAAGCGCTTTCTTCAGCTGGTTATATTCACATGACCAGGGTACAAGAGGCATCCCTTCCTGTTTGTATTGAAGGCAATGATGCTTTAGTCAAAGCTAAAACTGGCACTGGAAAAAGTGCGGCATTTTTGCTTCCTGCTATTGAAACAGTTCTGAAGGCTATGGGTAGCATCACCAATCGACGGGTGCCTCCAATATTTGTTCTTATACTCTGCCCTACCAGAGAACTTGCTAGCCAAATTGCTGCTGAAATGAAGGTTTTGCTGAAGAATCATGATGGAATTGGAGTGCAAACTCTAGTTGGAGGCATACGATTTAAAGTTGACCAAAACCACCTTGAATCAGATCAAAGCCAGATAATTATTGCTACTCCTGGTAGGTTGCTGGATCATATTGAGAACAAGTCTGGAATATCTGCACGGTTGATGGGCTTGCAGATGCTCGTACTTGATGAAGCTGATCATTTACTGGACCTGGGATTTCGAAAGGATGTGGAAAAGATTGTTGATTGTTTGCCCCGTCAGAGGCAAACATTGCTATTTTCTGCAACCATCCCAAAGGAGGTTCGTCGTATATCTCAACTTGTTTTGAAAAGGGAACACGCATACATTGATACAGTGGGGATAGGCTGTGTGGAAACTCCAACTAAGGTAAAGCAATCTTATCTTATTGCTCCACACGAATCGCATTTTCAAATTGTTCACCATCTTTTGAAGGAGCATATCTTGCAAGCTCCTGATTATAAGGTCATTGTCTTCTGTGTAACTGGGATGGTGACATCATTTATGTATCACCTTCTCCGGGAAATGAAAATGAATGTCAGAGAGATGCATCCCCGAAAACCTCAACCCTATCAAATTCGTATATCAGAGGAGTTCAGGGAATCCAAACTAGTAATTCTTGTGTCATCGGATGTTTCAGCACAGGGAATGAATTATCCTGATGTTACTTTAGTCATTCAGGTGGGTATTCCTTATGACCGAGAACAATATATACACCGTATTGGAAGAACAGGACGAGAAGGTATATTGTTGATTGCTCCATGGGAAGAGTACTTTTTGGATGAAATTAAGGATCTTCCTCTGCAGAGATTCCCTTTACCAGATATAGATCCCCAGACAAAGCTTAAGATGAAGGATTCAATAGGAAAAATTGATAGTGACATCAAAGAAGGAGCTTATCATGCTTGGCTTAGTTATTATAACTCGATCAGGGAAATTGGGAGGGATAAGACCACTCTAGCTGAACTGGCGGCCAAATTTTCTAAATCAATTGGTTTACAAACACCTCCTGCTCTCTTCAGAAAGACTGCACTAAAAATGGGTTTGAGAGATATTCCTGGCATCAGAATTCGCAGATAGCAG 2475 0.4267 MYSSILSERPRTISKLLCSFILARNMGGGPRTFPGGVNKWKWKRMHEKRARDKERRLLEQENQIYQARIRSHIRAQLAGKPDSGSTSHGPLTPEDHIKALANRFMKEGAEDLWNRNDGPLKSTLPFSKELPPTDRSNRRSGSIGSPVDLRKLIPEGRNVVSNNEIGNLTNFNGNYVHTRNYSVQSQRKFGRNDSSSAEDVSNSGLKGNSARFTVRNFVNNPRNMNNTSVDDYINNKKVMPKRRRKFWRNESSSSESESDWDAEGEPRNYSWGRRLNFAGEEVSGNDEDLRIGWDVTKMGSNASLGKYDIKSKRRMPPTLYDEENDLSEQVELIRDQLSKRKLAQNEEQKTEGDMMLSQRRFDECGISPLTVKALSSAGYIHMTRVQEASLPVCIEGNDALVKAKTGTGKSAAFLLPAIETVLKAMGSITNRRVPPIFVLILCPTRELASQIAAEMKVLLKNHDGIGVQTLVGGIRFKVDQNHLESDQSQIIIATPGRLLDHIENKSGISARLMGLQMLVLDEADHLLDLGFRKDVEKIVDCLPRQRQTLLFSATIPKEVRRISQLVLKREHAYIDTVGIGCVETPTKVKQSYLIAPHESHFQIVHHLLKEHILQAPDYKVIVFCVTGMVTSFMYHLLREMKMNVREMHPRKPQPYQIRISEEFRESKLVILVSSDVSAQGMNYPDVTLVIQVGIPYDREQYIHRIGRTGREGILLIAPWEEYFLDEIKDLPLQRFPLPDIDPQTKLKMKDSIGKIDSDIKEGAYHAWLSYYNSIREIGRDKTTLAELAAKFSKSIGLQTPPALFRKTALKMGLRDIPGIRIRR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00161 823 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 390 573 IPR014001 -
Bach4g00161 823 SMART helicmild6 631 712 IPR001650 -
Bach4g00161 823 Pfam DEAD/DEAH box helicase 383 561 IPR011545 GO:0003676|GO:0005524
Bach4g00161 823 CDD SF2_C_DEAD 588 712 - -
Bach4g00161 823 MobiDBLite consensus disorder prediction 112 149 - -
Bach4g00161 823 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 607 752 IPR001650 -
Bach4g00161 823 Gene3D - 583 803 IPR027417 -
Bach4g00161 823 MobiDBLite consensus disorder prediction 186 206 - -
Bach4g00161 823 PANTHER RNA HELICASE 330 747 - -
Bach4g00161 823 Gene3D - 336 575 IPR027417 -
Bach4g00161 823 MobiDBLite consensus disorder prediction 244 265 - -
Bach4g00161 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 712 IPR027417 -
Bach4g00161 823 SMART ultradead3 378 591 IPR014001 -
Bach4g00161 823 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 359 387 IPR014014 GO:0003724
Bach4g00161 823 Pfam Helicase conserved C-terminal domain 606 711 IPR001650 -
Bach4g00161 823 Coils Coil 43 63 - -
Bach4g00161 823 MobiDBLite consensus disorder prediction 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00161 Bach-Chr4 1081212 1085601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00161 361 732 Eukaryotic Initiation Factors Gene Family AT3G19760 27.595 2.24e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00161 - - pcin:129284459 1187.56