Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00158 ATGTCGTTCAGCGGGACCCAACAGAAATGCAAGGCTTGCGATAAAAGTGTTCATTTCGTGGACACATTGTCAGCCGATGGTGCTGTTTATCACAAGACCTGCTTCAAATGCAGTCATTGCAATGGGCAACTTGCTATAAGCACCTACTCCGCCATGGATGGAGTCCTGTACTGCAAACCTCACTTTGAGCAGCTTTTCAAGGAGACCGGTAACTTGGCAAAGAAATTCCAGACAGCCGGAATGCGTCAGAATGAGCAGCTGGCCAGGGCTCCTAGCAAACTCTCCGCCTTCTTCTCTGGGACCCAAGACAAATGTTCATCCTGCAAGAAAACTGTCTACCCATTGGAGAAGATCACCGTGGAAGGAGAATTTTACCACAAGTCATGCTTCAGATGCGCCCATGGAGGATGTTTCATCAACGCTTCATCCTATGCTGCTCTTGATGGATTTGTTTACTGCAAGCACCATTTTGCTCAGTTGTTCAAGGAGAAAGGTAGCTATAGTTATCTCATCAAGGCAACTTCAATGAAGAAAAATGAGTTGCAACAGAATGCCGAATCAGAATCAAAACCATCAGAAGCGGCGACAACAAAGGAAAAAGAACAAGAAACTGCTCAAGAGCAATAA 627 0.4561 MSFSGTQQKCKACDKSVHFVDTLSADGAVYHKTCFKCSHCNGQLAISTYSAMDGVLYCKPHFEQLFKETGNLAKKFQTAGMRQNEQLARAPSKLSAFFSGTQDKCSSCKKTVYPLEKITVEGEFYHKSCFRCAHGGCFINASSYAALDGFVYCKHHFAQLFKEKGSYSYLIKATSMKKNELQQNAESESKPSEAATTKEKEQETAQEQ 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00158 208 FunFam LIM domain and actin-binding 1 4 74 - -
Bach4g00158 208 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 131 169 - -
Bach4g00158 208 ProSiteProfiles LIM domain profile. 103 163 IPR001781 -
Bach4g00158 208 ProSiteProfiles LIM domain profile. 8 68 IPR001781 -
Bach4g00158 208 MobiDBLite consensus disorder prediction 180 208 - -
Bach4g00158 208 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 36 76 - -
Bach4g00158 208 SMART lim_4 9 61 IPR001781 -
Bach4g00158 208 SMART lim_4 104 156 IPR001781 -
Bach4g00158 208 Gene3D Cysteine Rich Protein 4 74 - -
Bach4g00158 208 Gene3D Cysteine Rich Protein 99 169 - -
Bach4g00158 208 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 97 130 - -
Bach4g00158 208 ProSitePatterns LIM zinc-binding domain signature. 10 44 IPR001781 -
Bach4g00158 208 MobiDBLite consensus disorder prediction 192 208 - -
Bach4g00158 208 FunFam LIM domain and actin-binding 1 99 169 - -
Bach4g00158 208 PANTHER OS06G0237300 PROTEIN 5 78 - -
Bach4g00158 208 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 3 35 - -
Bach4g00158 208 CDD LIM1_SF3 6 68 - -
Bach4g00158 208 Pfam LIM domain 105 160 IPR001781 -
Bach4g00158 208 Pfam LIM domain 10 65 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00158 Bach-Chr4 1067836 1068829 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LIM Bach4g00158 LIM 3.4e-10 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00158 - K24413 zju:107429947 320.087