Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00155 ATGAGGCAAGCAGGAGCATACTCAGGGTTACTATGTGGGGGCATTTCTGGAAAAATGGGACCTCAACCTCTGCCACTGGCAAGGATTAAGAAAATAATGAAGAAGTCTGGTGAGGACGTCAAAATGATTTCAGGGGAGGCTCCAATTGTTTTCGCCAAAGCATGTGAACTCTTCATTGAGGAAATAACCAAAAGATCGTGGGCCATCACTCTCCAAGGCAAAAGGAGAACTCTCCACAAAGAGGACGTGGCCACTGCCGTTATAGCCACTGATATCTTCGACTTTTTGATATCTTTGGTTTCCACTGGCAGCCCTATACATTCTGTCCCCGCTGCCACTATCGTGGAAATCGAAACTGAGGACTCCTAA 369 0.4661 MRQAGAYSGLLCGGISGKMGPQPLPLARIKKIMKKSGEDVKMISGEAPIVFAKACELFIEEITKRSWAITLQGKRRTLHKEDVATAVIATDIFDFLISLVSTGSPIHSVPAATIVEIETEDS 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00155 122 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 87 IPR003958 -
Bach4g00155 122 Gene3D Histone, subunit A 15 101 IPR009072 GO:0046982
Bach4g00155 122 SUPERFAMILY Histone-fold 18 96 IPR009072 GO:0046982
Bach4g00155 122 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 22 102 - -
Bach4g00155 122 FunFam Nuclear transcription factor Y subunit C 12 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00155 Bach-Chr4 1061071 1061439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00155 24 100 CCAAT-HAP5 Transcription Factor Family AT1G54830 67.532 1.06e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bach4g00155 CBFD_NFYB_HMF 3.7e-20 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00155 - - ccaj:109817175 185.267