Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00147 CATCTCATGGCGAAAACGTTGTTTGCGTTAAGCTGCCTTCGAAATGAGGATTCGGGCGATAGGTTGTCTCCGCGGCCACACTACCCGTCGATGCCCAGGTATCCAAAGGGTGTGTCGGCCGATGGAAGCAGCGTGGAGGACTCAGAGGCGAAGGCGCTGTTCTCGGTCATTGGAATGAGTTGCTCTGCTTGCGCTGGATCCGTTGAGAAAGCCATCAAGCGCCTTCCCGGAATTCGTGAAGCCGCCGTTGATGTTCTTAACAATAGAGCCCAGGTCTTCTTCTATCCTTCATTCGTTAACGAAGAGATCATTCGTGTAGCTATTGAAGAAGATGCTGGCTTTGAAGCCTCATTACTTACAGATGAGAAGAATGAGAGATCTGTTCAAGTATGTCGCATACGCATAAAAGGAATGACTTGCACTTCATGCTCCTCCACTGTTGAATCAGCTTTGCAAGCAAGTCAAGGTGTGATAAAAGCCCAAGTGGCCTTCGCAACTGAAGAAGCAGAAGTACACTACAGTCCAAATATTATTAACTACAATCAGATATTAAAAGTCGTAGAAGACACTGGATTTGAAGCCACACTTATCAGTTCAGGGGAAGACATGAGCAAAATAGACCTTAAGATTGATGGTGTCCGCACTGATCGTTCCATGAGACTGATCGAGAATTCTCTTCAGGCACTCCCAGGGGTCCAAAGCATGCAAGTTTATCCTGAACTAAACAAAATATCGCTTTCTTATAAACCTGATTTGACAGGACCAAGGAATTTCATTAATGTGATTGAGGAAACTGGATCTAGGCGTTTCAAAGCAAACATATTTCCTGAAGAAGGACGAAGAGATACTCATAGAAGAGAGGAAATTAAACAATATTATAAATCCTTCTTGTGGAGTTTGGTTTTCACTATTCCCGTCTTTCTGACCTCCATGGTCCTGATGTATATCCCTGGAACGAAGCATGGGCTGGACACCAACGTTGTCAATATGCTTACCGTGGGGGAGATCTTAAGATGGGTGCTTGCCACACCAGTACAGTTCATTATAGGCCGGCGATTCTACTCTGGTTCCTACAAAGCCTTACGCCATGGCTCTGCTAATATGGATGTTTTGATTGCCTTGGGAACAAATGCAGCATACTTCTATTCAGTATACTCTGTACTGAGAGCTGCTACCTCTCCTGATTTCAAGGGTACAGATTTCTTTGAGACTAGTGCGATGCTTATTTCATTTATCTTGCTTGGAAAGTATCTGGAAGTATTAGCCAAGGGGAAGACATCCAATGCAATTGCCAAGCTCATGAACCTGGCTCCTGAGACAGCTATATTGTTAACCTTAGACAATGAAGGAAATATTATTGGTGAACAAGAAATTGACAGCCGATTGATACAAAAGAATGATGTGATTAAAGTTATTCCCGGTGCAAAAGTAGCTTCAGATGGTTTTGTTATTTGGGGCCAGAGCCACGTGAATGAGAGCATGATAACAGGAGAGGCGCGTCCTGTGGCAAAGAGGAAGGGAGACACCGTCATAGGAGGAACTGTGAATCAGAATGGAGTATTGCATGTCAAGGCAACACGGGTTGGATCAGAGTGTGCTCTTTCTCAGATTGTTCGACTTGTAGAGTCAGCACAGATGGCAAAGGCTCCTGTTCAGAAGTTTGCTGACCGTATTTCAAAATACTTTGTGCCCCTGGTCATTTTCATCTCAGTTTCAACATGGTTCGCCTGGTTTTTAGCTGGGAAATTTCATTCTTATCCAAAATCTTGGATACCATCTTCAATGGATAGCTTTGAGTTAGCTTTGCAGTTTGGGATTTCTGTCATGGTCATAGCTTGTCCTTGTGCTTTAGGTCTCGCGACCCCAACTGCTGTTATGGTTGGCACTGGTGTTGGTGCATCTCAAGGAGTACTGATCAAAGGAGGGCAAGCATTAGAAAATGCACACAAGGTGGATTGTATTGTTTTTGACAAGACGGGTACTCTCACCATTGGGAAGCCTGTGGTTGTAAGCACAAAACTGTTGACGAATATGGTACTTCGGGATTTCTATGAACTTGTTGCGGCGGCCGAGGTGAATAGCGAGCATCCACTAGCCAAGGCCATAGTCGAGTACGCCAAAAAATTCAGAGAAGATGAGGAGAACCCTCTCTGGCCAGAAGCACGGGATTTTGTCTCCATTACTGGCCATGGAGTGAGGGCCACTGTCCGGAATAAGGAAATAATTGTGGGTAACAAGAGTTTGTTGTCTGAACACAATGTTGCCATTCCAGTTGATGCTGAAGATATACTGGCAGAAGTTGAGGGGTTGGCTCAAACTGGAATTTTGGTATCCATAAATGGGGAAGTGACTGGTATTGTAGCCGTATCTGACCCATTAAAACCAGGTGCTCAAGAAGTCATTTCCATTCTCAAATCTATAAATATTAGGAGCATCATGGTGACTGGTGACAACTGGGGAACTGCTAATTCTATAGCTAGGGAAGTTGGAATTGAAACTGTTATTGCTGAGGCCAAACCGGAGCAGAAAGCAGAGAAAGTGAAGGTTTTGCAGGGTTCTGGGCATACGGTGGCAATGGTAGGGGATGGTATCAATGATTCACCAGCACTTGTGGCAGCGGACGTGGGAATGGCAATTGGTGCAGGGACGGACATTGCTATTGAGGCAGCTGATATTGTTCTCATGAAAAGCAACTTGGAAGATGTGATAACTGCCATTGATCTTTCCAGAAAAACATTCTCTCGTATCCGTCTAAATTACTTCTGGGCTTTGGGTTATAATCTGCTTGGCATTCCAATTGCTGCTGGAGCCCTTTTTCCTTCTACAGGATTTCGATTGCCACCATGGATTGCCGGAGCTGCAATGGCAGCCTCTTCTGTGAGTGTTGTTTGCTGTTCCCTCTTGTTGAAGTATTACAAGAGACCCAAGAAGCTGGACAACCTTGAGATACGGGGCATAAAGGTTGAGTAA 2970 0.4478 MAKTLFALSCLRNEDSGDRLSPRPHYPSMPRYPKGVSADGSSVEDSEAKALFSVIGMSCSACAGSVEKAIKRLPGIREAAVDVLNNRAQVFFYPSFVNEEIIRVAIEEDAGFEASLLTDEKNERSVQVCRIRIKGMTCTSCSSTVESALQASQGVIKAQVAFATEEAEVHYSPNIINYNQILKVVEDTGFEATLISSGEDMSKIDLKIDGVRTDRSMRLIENSLQALPGVQSMQVYPELNKISLSYKPDLTGPRNFINVIEETGSRRFKANIFPEEGRRDTHRREEIKQYYKSFLWSLVFTIPVFLTSMVLMYIPGTKHGLDTNVVNMLTVGEILRWVLATPVQFIIGRRFYSGSYKALRHGSANMDVLIALGTNAAYFYSVYSVLRAATSPDFKGTDFFETSAMLISFILLGKYLEVLAKGKTSNAIAKLMNLAPETAILLTLDNEGNIIGEQEIDSRLIQKNDVIKVIPGAKVASDGFVIWGQSHVNESMITGEARPVAKRKGDTVIGGTVNQNGVLHVKATRVGSECALSQIVRLVESAQMAKAPVQKFADRISKYFVPLVIFISVSTWFAWFLAGKFHSYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALENAHKVDCIVFDKTGTLTIGKPVVVSTKLLTNMVLRDFYELVAAAEVNSEHPLAKAIVEYAKKFREDEENPLWPEARDFVSITGHGVRATVRNKEIIVGNKSLLSEHNVAIPVDAEDILAEVEGLAQTGILVSINGEVTGIVAVSDPLKPGAQEVISILKSINIRSIMVTGDNWGTANSIAREVGIETVIAEAKPEQKAEKVKVLQGSGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYFWALGYNLLGIPIAAGALFPSTGFRLPPWIAGAAMAASSVSVVCCSLLLKYYKRPKKLDNLEIRGIKVE 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00147 987 Pfam Heavy-metal-associated domain 131 191 IPR006121 GO:0046872
Bach4g00147 987 Pfam Heavy-metal-associated domain 52 111 IPR006121 GO:0046872
Bach4g00147 987 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 2 984 - -
Bach4g00147 987 Gene3D - 127 199 - -
Bach4g00147 987 PRINTS P-type cation-transporting ATPase superfamily signature 489 503 - -
Bach4g00147 987 PRINTS P-type cation-transporting ATPase superfamily signature 805 815 - -
Bach4g00147 987 PRINTS P-type cation-transporting ATPase superfamily signature 783 794 - -
Bach4g00147 987 PRINTS P-type cation-transporting ATPase superfamily signature 858 877 - -
Bach4g00147 987 PRINTS P-type cation-transporting ATPase superfamily signature 881 893 - -
Bach4g00147 987 PRINTS P-type cation-transporting ATPase superfamily signature 653 667 - -
Bach4g00147 987 FunFam Copper-transporting ATPase HMA5 47 119 - -
Bach4g00147 987 NCBIfam heavy metal translocating P-type ATPase 366 967 IPR027256 GO:0006812|GO:0016020|GO:0019829
Bach4g00147 987 ProSiteProfiles Heavy-metal-associated domain profile. 202 268 IPR006121 GO:0046872
Bach4g00147 987 CDD HMA 131 193 IPR006121 GO:0046872
Bach4g00147 987 FunFam Copper-transporting ATPase HMA5 126 197 - -
Bach4g00147 987 SUPERFAMILY Calcium ATPase, transmembrane domain M 398 932 IPR023298 -
Bach4g00147 987 SFLD C1.7: P-type atpase like 635 910 - -
Bach4g00147 987 Gene3D - 43 116 - -
Bach4g00147 987 CDD HMA 52 115 IPR006121 GO:0046872
Bach4g00147 987 Gene3D - 620 915 IPR023214 -
Bach4g00147 987 MobiDBLite consensus disorder prediction 15 41 - -
Bach4g00147 987 ProSitePatterns E1-E2 ATPases phosphorylation site. 655 661 IPR018303 -
Bach4g00147 987 SUPERFAMILY HAD-like 652 964 IPR036412 -
Bach4g00147 987 SUPERFAMILY Calcium ATPase, transduction domain A 453 539 IPR008250 -
Bach4g00147 987 SUPERFAMILY HMA, heavy metal-associated domain 197 265 IPR036163 GO:0046872
Bach4g00147 987 SUPERFAMILY HMA, heavy metal-associated domain 125 198 IPR036163 GO:0046872
Bach4g00147 987 ProSiteProfiles Heavy-metal-associated domain profile. 127 193 IPR006121 GO:0046872
Bach4g00147 987 FunFam Probable copper-transporting ATPase HMA5 748 915 - -
Bach4g00147 987 Gene3D - 421 543 - -
Bach4g00147 987 FunFam Copper-transporting ATPase 1, putative 421 543 - -
Bach4g00147 987 ProSiteProfiles Heavy-metal-associated domain profile. 48 115 IPR006121 GO:0046872
Bach4g00147 987 Pfam E1-E2 ATPase 452 631 - -
Bach4g00147 987 Gene3D - 739 789 IPR023299 GO:0000166
Bach4g00147 987 Gene3D - 660 738 IPR023299 GO:0000166
Bach4g00147 987 Gene3D - 202 264 - -
Bach4g00147 987 SFLD p-type atpase 635 910 IPR044492 -
Bach4g00147 987 PRINTS H+-transporting ATPase (proton pump) signature 889 914 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach4g00147 987 PRINTS H+-transporting ATPase (proton pump) signature 858 874 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach4g00147 987 SUPERFAMILY HMA, heavy metal-associated domain 45 120 IPR036163 GO:0046872
Bach4g00147 987 ProSitePatterns Heavy-metal-associated domain. 133 162 IPR017969 GO:0046872
Bach4g00147 987 Pfam haloacid dehalogenase-like hydrolase 649 872 - -
Bach4g00147 987 NCBIfam copper ion binding protein 51 114 IPR006122 GO:0005507
Bach4g00147 987 ProSitePatterns Heavy-metal-associated domain. 54 83 IPR017969 GO:0046872
Bach4g00147 987 NCBIfam HAD-IC family P-type ATPase 406 941 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach4g00147 987 CDD P-type_ATPase_Cu-like 292 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00147 Bach-Chr4 989826 994229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00147 1 987 Primary Pumps ATPases AT1G63440 76.861 0.0 1552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00147 K17686 - qsa:O6P43_034232 1670.98