Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00140 ATGGGAAAAGGTAGACCTAGGGCTGTGGAAAAAGGTGTAGTAGGGCAAAGCCTGAATGCTTCATCGTCTGGGTTACTGAATATACCATCAGGTCCCGTATATTACCCCAGTGAGGATGAGTTCAAGGACCCCTTGGAATATATATATAAGATTAGACCTGAGGCTGAGCCATATGGAATTTGTAGGATTGTACCACCAAAGAATTGGAAACCCCCATTTGTGTTGGATCTCGATTGTTTCTCTTTTCCCACTAAAACACAAGCCATTCACAAGTTGCAGGCACGTCCTGCTGCATGTGACTCCAAGACTTTTCAGTTGGAGTACTCTAGGTTCTTAGAGGATCACTGTGGCAAAAAGTCAAAGAAGAGGGTTGTATTTGAGGGGGAAGAGTTGGACTTGTGCAAATTATTTAATGCTGTTAAGCGTTTTGGTGGGTATGATAAGGTTGTGAAGGAAAAAAAATGGGGGGATGTTTCTAGATTTGTGAGGTCGGGGAAGAAGATTTCAGACTGTTCAAAACATGTCTTATGTCAACTATACGGAGAGCATTTGTATGATTACGAGAGTTACTATAATCAGTTGAATCAAGAAACAGCTTGGAGTTCAAAGAGAGGCTACAATGAAGATGAAAAAAGTGATCATGGCGTCCAACCTTCAGGATCCAGGAGGATGCGAAGAAGTAACAATTGTTTGAAAGCTAAAGTTTCTAAAGTACAGGAGGAAAAACATGATCAGATTTGTGAGCAATGTAGAAGTGGATTGCATGGGGAAGTGATGCTTTTGTGTGACAGATGTGATAAGGGCTGGCATACGTATTGTCTTTCCCCACCGTTGAAGGAAATCCCTCCAGGAAATTGGTATTGCTTCAATTGCTTGAATTCTGATGGGGACAGCTTTGGTTTTGTGCCTGGTAAACATTATTCTTTAGAAGCCTTTAGGCGCATGGCTGACCGGTCAAGGAGGAGATGGTTTGGACCCGGTTCTGTTTCAAGGACACAAATAGAGAAGAAGTTTTGGGAAATTGTAGAGGGATCGGTTGGTGAGGTTGAGGTTATGTATGGAAGTGACTTGGATACATCAGTCTACGGGAGTGGTTTTCCGCGTACAACTGATCAGAAACCACAAGCAATTGATGCAAAATTATGGGATGAATACTCGGCTAACCCATGGAATCTTAATAACCTGCCTAAATTGAAAGGGTCAATGCTTCAAGCGGTTCATCACAACATAACCGGCGTTATGGTACCTTGGCTGTATGTTGGAATGTTGTTCTCTTCTTTTTGCTGGCATTTTGAGGATCATTGCTTTTACTCAATGAATTATCTACACTGGGGAGAGCCAAAATGTTGGTACAGTGTTCCTGGTAATGAAGCAAGTGCTTTTGAGAAGGTGATGAGGAGCAATCTTCCTGATCTTTTTGATGCACAACCTGATCTGCTTTTTCAGCTTGTCACCATGTTAAACCCATCCATCTTGCAAGAAAATGGTGTGCCAGTCTACAGCGTACTTCAGGAGCCTGGAAATTTTGTTATTACATTCCCCCAGTCTTACCATGGAGGTTTCAATCTTGGTTTAAATTGTGCAGAGGCAGTTAATTTTGCTCCTGCTGACTGGCTACCATATGGTGCTTTTGCTGCTGATCTGTATCAGCGGTTTCATAAAACTGCTGTATTGTCTCACGAGGAGCTTCTTTGTGTAGTAGCACAGTATGGTGACATCAATGACAGAGTGTCTCCTTATTTGAAGAAAGAGTTGCTCAGCATATTTGATAGAGAGAAAATTTGGAGAGAGAAACTCTGGCGAAATGGTATCATCAACTTCTCTCGTATGGCTTCTCGGGAGGGTCCTCAATATGTGGGGACTGAAGAGGATCCAACATGCATTATTTGCCAGCAATATCTATATCTTTCAGCTGTTATGTGCAGTTGCAGGCCAACTGATTTCGTATGCCTGGAGCATTGGGAACACCTTTGTGAATGTAGAACTGTAAAACTTCGTCTTCTCTACCGTCATTCACTGGCAGAATTGTATGACTTGGCACTTTCTACGGATAAATATACTTCTGAAGCAGAGTGTCCGAATGTAATAGGGCAATTCTCTTGTTTGGGTGCTTTGACTAAAAAGGCAAAAGGTGGCCAAGTTACTCTTACACAACTTGCTACTCAATGGCTTCTGCAAGCTAACAAGATTCTTCAGAATCCTTTCTCAAGTGATGCTTTTGTGTCTGCACTAAGGGGAGCTGAACAATTTCTTTGGGCTGGTCCTGAGATGGATTCTGTGAGGGATATGGTGAAGAGTTTGATTCAAGCTCAAACGTGGGCTGAGGGGTTAAGAGATTGTGTGAGAAAGATTGAGTCCTGGTTGTCTCACCAGGACTCTGGTGTAGAGAAAGTTCACTTAGAATTTGTTGATGAATTACTCAGCTTGGATCCTGCACCATGCAATGAGCCTGGTCGTCAGAAGTTGAAGGAATACGCAGAAGAGGCAAGGTTATTAACACAGGAGATTGATACTGTCTTGTCAATGTGTTCAAAGATGTCTGAGTTGGAAGTTTTTTACTCCAGAGCTTGTGGTTTACCTGTCTACATGAAAGAGAGTGAAAAATTAGAAAGGAAAATTTCTTTAGCTAAGGCATGGCTGGATAGTGTTAGAAGGTTCATTTCAGTGAAACATCCTGCTGCAGTAGAGATTGATGTTCTGTACAAATTGAAGTCAGAGATTGTAGAGCTTCAAGTTCAACTTCCGGAGATAGACATGCTTCAGAATCTTATAAGCCAAGCTCAATATTGTCGTGCCCATTGTGGTGAGATACTGGAAGGTCCTATGAATTTAAAGAATGTTCGTGTAATGCTTAAGGAATGGGATAGTCTTACAGTTGATGTACCAGAGTTGAAGCTTCTAAGGCAATACCATGCAGATGCCATTTCATGGGTTTCCCACTTTAATGGTGTCTTAGGGACAGTGCATGAGCGAGAGGATCAAGATAATGTAGTTGACGAATTGAAACAGCTTCTAGAAGATGGGTTATCTTTGAAAATTCAAGTTGATGAGTTGCCTTTAGTTGAGGTTGAGTTGAAGAAAGCTTATTGCAGGGGGAAGGCTCTGAAGGCACATAGTTCTAAGATGCCTCTGGAATTCATTCAGGAACTGATGAAGGAGGCTGGAGTGTTACTAATTGAGGGAGAGAAATTATTTGTCAATTTATCTGGAGTACTTGCTTCTGCGATGTCTTGGGAGCAAAGGGCTAGGGAAATTCTTTCACATGAGGCTTCTATTTCTGACTTTGAGGACTTGTTAAGGGCTTCAGAAAACTTGTTTGTAATTCTTCCTTCTCTTAATGATATCAAAGATGCGGTACTGGAAGCTAATTCCTGGTTAGAGAATGCAAAACCATATTTAGCTTCTACTACTTCTGCTTCAATTTCCATGCTGAAATTCAAGGACCTGCAGATGTTGGTTTCTCAATCAGAGCTTCTTACAATATCTTTGGGAGAAAGAAGGATGCTAGCAAAAGTTCTAAAGAACTGCAAAGAATGGCAGCATGATGCTTGTTCAGTACTGAGGGATGCTCAGTCCCTTTTTGAATGCAACAATGAAATATGCGGTAGCCTAATATCAAAAGTTGAAGGTTTGATTGCAAGAACGTTATCTGTCACAAGATATGGTTTGTCATTCCATTTTGATTTCTGTGAGATCCCTGAGCTTCAAGCCACTTGTTCTTCACTGCAATGGTGCAAAAAGGCCCTTTCTTTCTGCAATATTTCTCCTTCTTTAGAGGATGTTTTGGAGGTTGCAGAAGACATTCCTCATGCCTCTGTCTCTGGTACTATGTTGAATATGCTGGTTGATGGGGTTAAATGGCTTAGGCGAGCCTTTGAGGTAATCTCTGGACCACGAAATTCCAGAAGATGCAAGTTGAGTGATGTTGAAGATATTCTTATGGGTTACAAGAATGTTCATATGCCCTTTGCAGTGGTAATCTGTCAACTTGAAGAAACGATTGGAAAACATAAGTTGTGGCAAGAACAGGTGCAACAGTTTCTTCATCTAAATTATAGGGAACGATCTTTGTCATCTATGTTGCAGCTCAAGGAACTTGGACAGTCTGTTGCCTTTAGTTGCTCAGAACTGAATTTGATTGTATCTGAAGTTGGAAAGGTGGAGAGTTGGAAGAGTCGTTGCATGGATAGTATAGGGGCTTTGGTCCATGATAAGAATTCATTGCTAGACACTCTGCAGAAGATAAATCAGACTCTAGATAGATCATTGTTCATATATGGCAAGTTGCAAGACTGGAAAGATAGAAACTTGTGCATCTGCTGCTTCAATGATTTTGAAAATCAGGAGTTTCTTACTTGTTTGACTTGTAAGGACTGCTATCATTTGCGGTGCATTGGGACAAGTGCAGTGGATAGAGATCATGAAGATTATAAGTGCACTTATTGTCAAATTTTGAAGGGTGAATTAAATTATCAAAATGTCGGTGGCCCCCTGAGATTTGGGGGAAATCGTGCTGACCTGAAAACTCTTCATGAACTTCTATCTGATACTGAAAGCTTTTGCGTATGGGTTGCTGAAAGAGATGTCCTAAGCCTACTTGTGGAGCGAGCCCATGCATGCAAAGCTTGCTTGAGAGAAATAGTGGATCTTGCATCAGCTAATGTGGACAAAGATTTTAGTACGATCTCTGAAAAATTGACCATTGCTATAAAGGCCATTGAAGTGGCTGGTGTATGTGATCAGCATGATAATTGTGACTTTGAGTTGGCTTTAGCGAGACATTTTTGGAAAGTTCAAGTGAATGAATTGCTAAATGGTCTTCAAAAGCCCTCTATCCAGCAGATTCAGAAGCATCTGAAAGAGGGACTGGCTATGGAAATACCGCCTGAAGATTACTATATGCTGAAACTTACAAAAGTGAATTGCATTGGTTGGGAGTGGGCAGAACTAGCAAAGAAGGTTGCAATTGATTCTGGAGCACTAAGCTTAGATAAAGTTTTTGACCTTATTGTAGAAGGTGAAAACTTGCCTGTTGATGTACACGAGGAACTCATGATATTAAAAACTCGAAGTGTGCTTTATTGCATCTGCCGAAAGCCCTTTGATCCCGGAAGGATGATTGGCTGCGATCAATGTGGGGAGTGGTATCACTTTGATTGCATGAAATTACCATACACAGTAGAGGCATACATCTGTCCTGCATGTAACCCATGTACAGAAGTGTTGTCTACAACATCGCTTGACCATGAGAGGATAACTAGTGCTAAATTTGAGGAGCCTAAAACTCCATCTCCAAGGCACACGAAACCAAGAAAGAAACAAAAGAGAGATTCGCCTAGTCTCACCCAGAATATGCTCGTGGCACCCAAGGATCAAAATAGTAATTTTAGGTATTCCAGCGGGATTGAATGTCTATGGTGGCGTAATCGAAAGCCTTTCAGGAGAGCAGCTAAGAAACGTCTTGATCTTGGAAGTCTTTCTCCATTTATATGTATACAACGATAATTAGTTATGGTAGCAGATAGTTCATCAGTCATTAAATTGATTCAATTGATTATTATGGCGTTACCTCAGCCATTTTTCATCCATCTAAATATGAGAAAATTTTGATTGTTCATTCATCACCAACCGTAGCTGTCTCCATCTAGCAACATGTGAGATGTTGGGCGTATACTTGCAAGGTGAAATGAAATAAATCAAGCAT 5704 0.4111 MGKGRPRAVEKGVVGQSLNASSSGLLNIPSGPVYYPSEDEFKDPLEYIYKIRPEAEPYGICRIVPPKNWKPPFVLDLDCFSFPTKTQAIHKLQARPAACDSKTFQLEYSRFLEDHCGKKSKKRVVFEGEELDLCKLFNAVKRFGGYDKVVKEKKWGDVSRFVRSGKKISDCSKHVLCQLYGEHLYDYESYYNQLNQETAWSSKRGYNEDEKSDHGVQPSGSRRMRRSNNCLKAKVSKVQEEKHDQICEQCRSGLHGEVMLLCDRCDKGWHTYCLSPPLKEIPPGNWYCFNCLNSDGDSFGFVPGKHYSLEAFRRMADRSRRRWFGPGSVSRTQIEKKFWEIVEGSVGEVEVMYGSDLDTSVYGSGFPRTTDQKPQAIDAKLWDEYSANPWNLNNLPKLKGSMLQAVHHNITGVMVPWLYVGMLFSSFCWHFEDHCFYSMNYLHWGEPKCWYSVPGNEASAFEKVMRSNLPDLFDAQPDLLFQLVTMLNPSILQENGVPVYSVLQEPGNFVITFPQSYHGGFNLGLNCAEAVNFAPADWLPYGAFAADLYQRFHKTAVLSHEELLCVVAQYGDINDRVSPYLKKELLSIFDREKIWREKLWRNGIINFSRMASREGPQYVGTEEDPTCIICQQYLYLSAVMCSCRPTDFVCLEHWEHLCECRTVKLRLLYRHSLAELYDLALSTDKYTSEAECPNVIGQFSCLGALTKKAKGGQVTLTQLATQWLLQANKILQNPFSSDAFVSALRGAEQFLWAGPEMDSVRDMVKSLIQAQTWAEGLRDCVRKIESWLSHQDSGVEKVHLEFVDELLSLDPAPCNEPGRQKLKEYAEEARLLTQEIDTVLSMCSKMSELEVFYSRACGLPVYMKESEKLERKISLAKAWLDSVRRFISVKHPAAVEIDVLYKLKSEIVELQVQLPEIDMLQNLISQAQYCRAHCGEILEGPMNLKNVRVMLKEWDSLTVDVPELKLLRQYHADAISWVSHFNGVLGTVHEREDQDNVVDELKQLLEDGLSLKIQVDELPLVEVELKKAYCRGKALKAHSSKMPLEFIQELMKEAGVLLIEGEKLFVNLSGVLASAMSWEQRAREILSHEASISDFEDLLRASENLFVILPSLNDIKDAVLEANSWLENAKPYLASTTSASISMLKFKDLQMLVSQSELLTISLGERRMLAKVLKNCKEWQHDACSVLRDAQSLFECNNEICGSLISKVEGLIARTLSVTRYGLSFHFDFCEIPELQATCSSLQWCKKALSFCNISPSLEDVLEVAEDIPHASVSGTMLNMLVDGVKWLRRAFEVISGPRNSRRCKLSDVEDILMGYKNVHMPFAVVICQLEETIGKHKLWQEQVQQFLHLNYRERSLSSMLQLKELGQSVAFSCSELNLIVSEVGKVESWKSRCMDSIGALVHDKNSLLDTLQKINQTLDRSLFIYGKLQDWKDRNLCICCFNDFENQEFLTCLTCKDCYHLRCIGTSAVDRDHEDYKCTYCQILKGELNYQNVGGPLRFGGNRADLKTLHELLSDTESFCVWVAERDVLSLLVERAHACKACLREIVDLASANVDKDFSTISEKLTIAIKAIEVAGVCDQHDNCDFELALARHFWKVQVNELLNGLQKPSIQQIQKHLKEGLAMEIPPEDYYMLKLTKVNCIGWEWAELAKKVAIDSGALSLDKVFDLIVEGENLPVDVHEELMILKTRSVLYCICRKPFDPGRMIGCDQCGEWYHFDCMKLPYTVEAYICPACNPCTEVLSTTSLDHERITSAKFEEPKTPSPRHTKPRKKQKRDSPSLTQNMLVAPKDQNSNFRYSSGIECLWWRNRKPFRRAAKKRLDLGSLSPFICIQR 1834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00140 1834 SUPERFAMILY FYVE/PHD zinc finger 1433 1484 IPR011011 -
Bach4g00140 1834 Gene3D Cupin 32 535 - -
Bach4g00140 1834 Gene3D - 84 189 IPR036431 GO:0003677
Bach4g00140 1834 ProSiteProfiles Zinc finger PHD-type profile. 244 294 IPR019787 -
Bach4g00140 1834 SMART bright_3 99 193 IPR001606 GO:0003677
Bach4g00140 1834 SUPERFAMILY ARID-like 81 203 IPR036431 GO:0003677
Bach4g00140 1834 Pfam ARID/BRIGHT DNA binding domain 106 188 IPR001606 GO:0003677
Bach4g00140 1834 CDD PHD_RSF1 247 291 - -
Bach4g00140 1834 SMART PHD_3 1437 1483 IPR001965 -
Bach4g00140 1834 SMART PHD_3 1694 1736 IPR001965 -
Bach4g00140 1834 SMART PHD_3 246 292 IPR001965 -
Bach4g00140 1834 SMART JmjN_1 30 71 IPR003349 -
Bach4g00140 1834 CDD ARID 100 188 - -
Bach4g00140 1834 ProSiteProfiles ARID domain profile. 98 192 IPR001606 GO:0003677
Bach4g00140 1834 Pfam PLU-1-like protein 894 1014 IPR013637 -
Bach4g00140 1834 Pfam PLU-1-like protein 944 1181 IPR013637 -
Bach4g00140 1834 Pfam PLU-1-like protein 1121 1393 IPR013637 -
Bach4g00140 1834 SMART cupin_9 384 550 IPR003347 -
Bach4g00140 1834 SUPERFAMILY FYVE/PHD zinc finger 241 294 IPR011011 -
Bach4g00140 1834 FunFam Transcription factor jumonji (JmjC) domain-containing protein 17 121 - -
Bach4g00140 1834 SUPERFAMILY Clavaminate synthase-like 340 565 - -
Bach4g00140 1834 MobiDBLite consensus disorder prediction 203 220 - -
Bach4g00140 1834 MobiDBLite consensus disorder prediction 203 225 - -
Bach4g00140 1834 ProSitePatterns Zinc finger PHD-type signature. 247 291 IPR019786 -
Bach4g00140 1834 SUPERFAMILY FYVE/PHD zinc finger 1691 1744 IPR011011 -
Bach4g00140 1834 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1681 1737 IPR013083 -
Bach4g00140 1834 MobiDBLite consensus disorder prediction 1753 1784 - -
Bach4g00140 1834 PANTHER LYSINE-SPECIFIC DEMETHYLASE 27 1012 - -
Bach4g00140 1834 ProSiteProfiles JmjC domain profile. 384 550 IPR003347 -
Bach4g00140 1834 ProSiteProfiles JmjN domain profile. 31 72 IPR003349 -
Bach4g00140 1834 Pfam C5HC2 zinc finger 627 678 IPR004198 -
Bach4g00140 1834 Pfam PHD-finger 1694 1738 IPR019787 -
Bach4g00140 1834 Pfam PHD-finger 246 293 IPR019787 -
Bach4g00140 1834 FunFam Predicted protein 352 555 - -
Bach4g00140 1834 ProSitePatterns Zinc finger PHD-type signature. 1695 1735 IPR019786 -
Bach4g00140 1834 Pfam jmjN domain 32 65 IPR003349 -
Bach4g00140 1834 SMART ARID_2 95 188 - -
Bach4g00140 1834 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 241 293 IPR013083 -
Bach4g00140 1834 Pfam JmjC domain, hydroxylase 417 533 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00140 Bach-Chr4 949348 963900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00140 40 95 JUMONJI Transcription Factor Family AT4G20400 51.667 2.04e-09 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Bach4g00140 PLU-1 2.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00140 K11446 - gmx:100819576 2781.9