Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00110 ATGGCTCGACAGCTGTGTGAAAATAAATCGAGGGATTTGGTATCATCGTCAACTGGATTCTGCTACTCGGATGTATCATCAGGTTCTGGTAACCCAACGATTCAAAACCAGATGGTGAACCAGATCCAAGGCTTTGTCTCCGTCTCCGACTCTGACACAGATATGTTCAACCTCAGCACAGGAATGGAGATGATAGGGTTTTCCAAGAATCTACAGCAACAGACTGACAATAACCCAGTGATGTGGAAGAGTTTCTTTGCCAAACCAGCTCCTTCCTCTTCAAAGACCACCAATTTTTACCAGCATCAGCAGGACTATCATAAACCAGATTTCACATCTGGGATTTCCGAAACAACCAGCGACAATCTAATAGTTGCGCCTCACGACCCCGCCGCATGGCAAGACGGAAGATTACTAGTTGATGATTCATCTTTGAAGTGTGTGTTCCCTTGTGAAGGAAATGAAAGGCCTAGTCAAGGTCTTTCACTGTCTCTCAGTTCAGCCAATCCTTCAAGTATTGGCTTACAATCTTTTGAACTCAGGCAAACTAATTATCACCTTCATCAGCACCAACATGATTTCGTTTCTTCAACTAGTAGAGATGGTTTCTTCGGAAAAACGGCCAACACTCAACAGCAACAACAAACGTTGCAAGATGGGTATTTGGGTAAATCTCCTGACTATTTTTATCATGGACAAGGACATTTCCTGTTCAAGAACTCCAAGTATTTGGTCCCAGCACAGGAGCTTCTGAACGAGTTCTGCAGTCTTGGAACGAAGCCAAGTGATATATTAAAGCAGAAGTCTCAAAAGAACAAGCAGTGGGAAGAGGATAGGGACAGCGGTTCCTCAAAGAAGCATATACTTAGCTCCTTAGAATTCGTAGAATTGCAGAAGAGAAAAACAAAGCTGCTTTCGATGCTGGAAGAGGTGGACAGAAGATACAGACATTACTGTAATCAGATGAAGGCCGTTGTGTCATCGTTTGAAGCTGTGGCGGGACAAGGAGCGGCAGCAGTGTATTCAGCGCTGGCCTTGAAAGCCATGTCAAGGCATTTTAGATGCTTGAAAGATGGGATTGTGAGTCAGATACAGGCGACAAGGAAAGCCATGGGAGAGAAAGACCCAATTGCACCAGGTACAACAAAGGGTGAAACACCCAGACTGAAAATCATTGACCAAACAATCAGACAACAAAGGGCCTTCCAGCAAATGAGCATGATGGAAAGCCATCCATGGAGACCCCAACGCGGCCTTCCTGAGAGATCCGTCTCCGTTCTTCGCGCTTGGCTTTTCGAGCATTTTCTACACCCGTACCCAAGCGATGTTGATAAACATATTTTAGCCCGCCAAACCGGCCTCTCAAGAAGCCAGGTATCAAATTGGTTTATTAATGCAAGGGTGAGACTTTGGAAGCCAATGGTGGAAGAAATGTACTTAGAAGAAGTGAAGGAGCATGAAATCAACATGGCTTCCTCGGAGGGAATCACCGATCCCGAAGACAATAATCAGAATACTGTGCAAAACCCATTCTTAAACCGACCTGAAGAAGAGAAGCCGATACCTGATCGACTCGTACGGATTGACTCGGAGTGTGTATCCTCCATCATAAATAACTCATCAGATCACAAAGACGACCCTATTGCAAAGGGCAGTAAAACCCTCCAAAACCACCACCATATACAACAAGACCAATGCTTGGGGCGAGTCACAGACACATTTGGGTCCATGGAGCTTGATTTTTCATCATATACAACGAGTCACCACTCAGCTGGCATGGTTTCCTACACCAATGAGAATTCCAACCAGAATTTCAACGCCGGTGGAGTGTCACTGACTCTAGGGTTACAGCAACATGGTGGAAGCGGGGTGAGTTTGGCTTTCCCACCACCCACTCACAGTTCACTCTTCTACCCAAGGGAGCAAATGGAAGATTGTCAACCAGTTCAGTACTCGCTTTTGGACGGCGAAGGACAAAATCTTCCGTACAGAAATTTAATGGGGGCACAGTTGCTGCATGATTTGGCAGGATAG 2034 0.4553 MARQLCENKSRDLVSSSTGFCYSDVSSGSGNPTIQNQMVNQIQGFVSVSDSDTDMFNLSTGMEMIGFSKNLQQQTDNNPVMWKSFFAKPAPSSSKTTNFYQHQQDYHKPDFTSGISETTSDNLIVAPHDPAAWQDGRLLVDDSSLKCVFPCEGNERPSQGLSLSLSSANPSSIGLQSFELRQTNYHLHQHQHDFVSSTSRDGFFGKTANTQQQQQTLQDGYLGKSPDYFYHGQGHFLFKNSKYLVPAQELLNEFCSLGTKPSDILKQKSQKNKQWEEDRDSGSSKKHILSSLEFVELQKRKTKLLSMLEEVDRRYRHYCNQMKAVVSSFEAVAGQGAAAVYSALALKAMSRHFRCLKDGIVSQIQATRKAMGEKDPIAPGTTKGETPRLKIIDQTIRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEVKEHEINMASSEGITDPEDNNQNTVQNPFLNRPEEEKPIPDRLVRIDSECVSSIINNSSDHKDDPIAKGSKTLQNHHHIQQDQCLGRVTDTFGSMELDFSSYTTSHHSAGMVSYTNENSNQNFNAGGVSLTLGLQQHGGSGVSLAFPPPTHSSLFYPREQMEDCQPVQYSLLDGEGQNLPYRNLMGAQLLHDLAG 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00110 677 Pfam Associated with HOX 239 360 IPR006563 -
Bach4g00110 677 SUPERFAMILY Homeodomain-like 414 479 IPR009057 -
Bach4g00110 677 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 139 500 - -
Bach4g00110 677 MobiDBLite consensus disorder prediction 495 512 - -
Bach4g00110 677 Pfam Homeobox KN domain 430 469 IPR008422 GO:0003677|GO:0006355
Bach4g00110 677 SMART prehox3 232 362 IPR006563 -
Bach4g00110 677 ProSiteProfiles 'Homeobox' domain profile. 410 473 IPR001356 GO:0003677
Bach4g00110 677 CDD homeodomain 413 474 IPR001356 GO:0003677
Bach4g00110 677 Gene3D - 416 478 - -
Bach4g00110 677 MobiDBLite consensus disorder prediction 493 517 - -
Bach4g00110 677 FunFam BEL1-like homeodomain protein 4 416 478 - -
Bach4g00110 677 SMART HOX_1 413 477 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00110 Bach-Chr4 748337 751546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00110 38 676 Homeobox Transcription Factor Family AT5G41410 43.086 2.80e-140 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bach4g00110 POX 1.1e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00110 - - tcc:18606572 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00110 4 748337 751546 Bach4g00110 4 748337 751546 BWGD
Bach4g00110 4 748337 751546 Bach4g00110 4 748337 751546 ECH