Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00070 ATGACTGCGCCTCCGATCAAATACACAGAGCACTTGAACCACACTAAACTACTGCGACCAGCAAATGAAATGAAGTATCCTAGAGTCGTAAGAATATCTGTGACGGACAGTGATTGCACCGACTCATCCAGCGACGAAGAAGCCTATGACACTTTCAGACGCTACCATAGAGTGAGGAAGTTTGTTAATGAGATTACCATTGATTCTTGCTCCAGCGAAAACGATGCCTTTTCAAGGAGAAAGCTCGCTAAGAGTTGTAGGACTAAGTCCACCGTCAACAGAGGTGGAGTTTCGGTGAGTCGCCGGCAGTTGAAGGTTTCTTCTGGCAAAAAGTTTCGCGGGGTCAGACAGAGGCCCTGGGGAAAATGGGCGGCTGAGATCAGAGACCCTTCGCGACGTGTACGGCTGTGGTTAGGTACTTACGATACAGCTGAGGAAGCTGCCATGGTCTATGACAACGCGGCCATTCAGCTACGTGGAGCTGACGCGCTCACCAATTTCATAACGCCGCCAGGTAGGTGCTCGCTTTCGCCGGAGAAAAAGTCGGCTGTCCACTTTAGTTGTACTGCTGGAGAGGAGTCTCTCAACAATTTATTTTCTCCTATATCTGTTCTGCAATGTTCTTCTCAGTCTCTATCGGAGGAAGCTGAATCTATAACCACCAGAGATGATACGAATACCAGTGAATCTCGAGAATTTCTGGATGAATCATGCATCTCGGAGAATCTGTCCGATTTTCCAGATGACTCAAATTTTGAGTCCATCTTTTCAAGTGACATATTTGATTTCCAGTGCTCGTTGCCGGATATATTTGACAACAGCAGTGCACCAGAAACTATCTTCACCGAAGATTGCTCCGATAATTTTCTCATTTCAGGTGACAATTTCGGTTTCTCCAGTTGGGATGGAGATGACAATTTCCAAGATTTCGGCGATTTATTTGTCTCAGATCCTCTTGTTGCTCTTTAA 969 0.4613 MTAPPIKYTEHLNHTKLLRPANEMKYPRVVRISVTDSDCTDSSSDEEAYDTFRRYHRVRKFVNEITIDSCSSENDAFSRRKLAKSCRTKSTVNRGGVSVSRRQLKVSSGKKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAAMVYDNAAIQLRGADALTNFITPPGRCSLSPEKKSAVHFSCTAGEESLNNLFSPISVLQCSSQSLSEEAESITTRDDTNTSESREFLDESCISENLSDFPDDSNFESIFSSDIFDFQCSLPDIFDNSSAPETIFTEDCSDNFLISGDNFGFSSWDGDDNFQDFGDLFVSDPLVAL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00070 322 Pfam AP2 domain 111 160 IPR001471 GO:0003700|GO:0006355
Bach4g00070 322 SUPERFAMILY DNA-binding domain 111 167 IPR016177 GO:0003677
Bach4g00070 322 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 27 230 - -
Bach4g00070 322 PRINTS Ethylene responsive element binding protein signature 112 123 IPR001471 GO:0003700|GO:0006355
Bach4g00070 322 PRINTS Ethylene responsive element binding protein signature 134 150 IPR001471 GO:0003700|GO:0006355
Bach4g00070 322 FunFam Ethylene-responsive transcription factor 2 110 169 - -
Bach4g00070 322 CDD AP2 110 167 IPR001471 GO:0003700|GO:0006355
Bach4g00070 322 SMART rav1_2 111 174 IPR001471 GO:0003700|GO:0006355
Bach4g00070 322 Gene3D AP2/ERF domain 110 169 IPR036955 GO:0003700|GO:0006355
Bach4g00070 322 ProSiteProfiles AP2/ERF domain profile. 111 168 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00070 Bach-Chr4 482523 483491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00070 1 322 AP2-EREBP Transcription Factor Family AT4G23750 42.061 3.82e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach4g00070 AP2 5.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00070 - - qsa:O6P43_024008 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00070 4 482523 483491 Bach4g00070 4 482523 483491 BWGD
Bach4g00070 4 482523 483491 Bach4g00070 4 482523 483491 ECH