Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00065 ATGTCTTCTTCTACGGTAGGGGAGGAAAATCAACTTCGGGTGATTACCGATAAGGCCACTGGTGAATTCAGGGGTTATGGAATTGTTACTTTTAAGCACGTCGATGATGCTTTGCTGGCTCTTAAGGAGCCTAGCAAGAGGATAGATGGTCGTGTCACTGTTATACAGCTTGCGGCAGCAGGAAATTCGGGTTCGATTACGAACGCGGTAGACATTGCATTGAGGAAGATATACGTGGCTAATGTGCCGTCGGAGCTGCCGACTGATAAACTATTGGCTCATTTTTCGCTGTATGGAGAGATTGAAGAAGGACCGTTGGGCTTTGACAAGCAGACGGGTAAGTCAAAGGGGTTTGCTTTGTTTGTTTATAAGACAGCGGAGGGGGCACAAGCAGCACTAGTGGATTCGGTGAAGACTGTTGAGGGAAAGCAGCTGACTTGCAAGTTGGCGATAGATGGGAAGCAAGGGAAACGGGGGGGTGGCCCAATCGGAGATGGAGTGCAGGGTCCTGGAAATTCTCATGAGGACTTAAGTGAGAAACAGGGGTGCACGATTTCAGTAGAGGACTTTCAACCCAGGGATATGGGTCAGGGTGCAGGTAAGGTCACGGGTCCTGGAGCAACGTTTTCGGGTCGGGTCCACATTACCCAGGGGCAGCGAAATTCTTACGGGCTGACTTTGCTCGATAGCCCCAAGCCTTCGTTTCTTGGTTCTGTGGCCAGTCGGCCTCCTTCGACGCCTCAGGCAGGTGCCCAGATAGGCACAACTCACAATAGCCCAGATAGGCACTTACGGGTTCCTATCCTGGGAGAAGCTGAGGGAGAGGAATCAGAGGCAGAGCTGGTCTTGCTGGACGCCGAGGAAGAAATCCAAGGGGTAGCCGACGATGCAGTGGGTTGGTTAGACAATGGCTGA 915 0.5191 MSSSTVGEENQLRVITDKATGEFRGYGIVTFKHVDDALLALKEPSKRIDGRVTVIQLAAAGNSGSITNAVDIALRKIYVANVPSELPTDKLLAHFSLYGEIEEGPLGFDKQTGKSKGFALFVYKTAEGAQAALVDSVKTVEGKQLTCKLAIDGKQGKRGGGPIGDGVQGPGNSHEDLSEKQGCTISVEDFQPRDMGQGAGKVTGPGATFSGRVHITQGQRNSYGLTLLDSPKPSFLGSVASRPPSTPQAGAQIGTTHNSPDRHLRVPILGEAEGEESEAELVLLDAEEEIQGVADDAVGWLDNG 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00065 304 SUPERFAMILY RNA-binding domain, RBD 5 63 IPR035979 GO:0003676
Bach4g00065 304 Gene3D - 3 63 IPR012677 -
Bach4g00065 304 PANTHER GEO13361P1-RELATED 5 196 - -
Bach4g00065 304 MobiDBLite consensus disorder prediction 234 263 - -
Bach4g00065 304 MobiDBLite consensus disorder prediction 239 259 - -
Bach4g00065 304 MobiDBLite consensus disorder prediction 157 178 - -
Bach4g00065 304 Gene3D - 67 224 IPR012677 -
Bach4g00065 304 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 77 145 IPR000504 GO:0003723
Bach4g00065 304 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5 52 IPR000504 GO:0003723
Bach4g00065 304 Coils Coil 269 289 - -
Bach4g00065 304 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 75 152 IPR000504 GO:0003723
Bach4g00065 304 SMART rrm1_1 76 148 IPR000504 GO:0003723
Bach4g00065 304 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 60 IPR000504 GO:0003723
Bach4g00065 304 SUPERFAMILY RNA-binding domain, RBD 70 173 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00065 Bach-Chr4 447493 449042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00065 5 77 C2H2 Transcription Factor Family AT2G19380 38.462 1.17e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00065 K12741 - qsa:O6P43_001025 264.618