Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00054 ATGGAGCGAATGAAGGACGTTGCTGATATAGGTTCCTCTCTATCAGAGCTCATATTATCGGGTGGGGCTAACACCTTGGATTCAATTTTCTCTCATTGCCCGAGCCCGCCAACAAATACTATTACCAATCCTATGTTTGAGCCATTGGGCTCTTCCGTCTACCTCCACCAGAGAGAGCTTCTGCAACAGTTATATGAGCAAAGCAGGGAAAATGGTTCTTATGTCGGCACTTCATTCACAAATCAGCCTCTAAACTCTGTCTGCACAACTTCTACTTCTCTTACGACATCCTCCAAGAAAAAGCTATACAGGGGAGTGAGACAGAGGCACTGGGGCAAATGGGTCGCCGAGATTAGACTTCCTCAGAACAGAATGAGAGTCTGGTTGGGTACTTATGAGAGTGCTGAAGCTGCAGCTTATGCTTATGATCGTGCAGCTTATAAGCTTCGAGGTGAATATGCGCGTCTCAATTTCCCAAATCTCAAGGACCCAAGTAAATTAGGATTTGGAGATAGCACAAGATTGAATGCTTTGAAGAACTCTGTGGATGCTAAAATCCAAGCTATATGTCAGAAGGTGAAAAGGGAGAAAGCAAAAAGGAAAGCGGCAAAGAAGCTGACTTCAGGTACTCACAAGTCTGAAACTAATGTTGGTGAGAGCGATAAGTCGCAAAAGAATATCGAATCCTCCTCTTGCTCTTCGTCTCCCTTACCTTTATCACCGTTAATTTTTGATGATTACTGGACAAACAAGTTATTTTCACCAAGTATTTCGGAAGATGGAATTTGGAAGGGGGACAACTCACCTTCCTCTGTTTCAACAGAATTTCATACGACGGCAACAGAGGAATCAGAACTCGAAGGTTGTTCCTTGGCTAGGATACCATCCTTCGATCCCGAGTTAATTTGGGAAGTTCTCGCCAATTAG 927 0.4391 MERMKDVADIGSSLSELILSGGANTLDSIFSHCPSPPTNTITNPMFEPLGSSVYLHQRELLQQLYEQSRENGSYVGTSFTNQPLNSVCTTSTSLTTSSKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYESAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDSTRLNALKNSVDAKIQAICQKVKREKAKRKAAKKLTSGTHKSETNVGESDKSQKNIESSSCSSSPLPLSPLIFDDYWTNKLFSPSISEDGIWKGDNSPSSVSTEFHTTATEESELEGCSLARIPSFDPELIWEVLAN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00054 308 ProSiteProfiles AP2/ERF domain profile. 102 159 IPR001471 GO:0003700|GO:0006355
Bach4g00054 308 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 45 306 - -
Bach4g00054 308 FunFam Ethylene-responsive transcription factor 2 101 160 - -
Bach4g00054 308 MobiDBLite consensus disorder prediction 200 235 - -
Bach4g00054 308 Pfam AP2 domain 103 152 IPR001471 GO:0003700|GO:0006355
Bach4g00054 308 Gene3D AP2/ERF domain 102 160 IPR036955 GO:0003700|GO:0006355
Bach4g00054 308 PRINTS Ethylene responsive element binding protein signature 103 114 IPR001471 GO:0003700|GO:0006355
Bach4g00054 308 PRINTS Ethylene responsive element binding protein signature 141 161 IPR001471 GO:0003700|GO:0006355
Bach4g00054 308 SUPERFAMILY DNA-binding domain 102 159 IPR016177 GO:0003677
Bach4g00054 308 SMART rav1_2 102 165 IPR001471 GO:0003700|GO:0006355
Bach4g00054 308 CDD AP2 103 161 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00054 Bach-Chr4 379943 380869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00054 7 308 AP2-EREBP Transcription Factor Family AT1G64380 44.286 7.75e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach4g00054 AP2 9.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00054 - - qsa:O6P43_024033 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00054 4 379943 380869 Bach4g00054 4 379943 380869 ECH