Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00045 ATGAATCCAACATATCAAAATCTGGCCTTGGCTCACATATCGTGTTTCTCTTCTCAAATATTGTACGTAGAAAAAATGGCTACCTTGGCGCCCTTCTTGTTAATATTTTCAATGTTTATGTTGCTTCCTCACTCGATTACAATTACAAAAGCTCAAGTTTGTGAAAGCACATCATGCGGAAGCGGCGGAGTTTCCATTGAGTTCCCTTTTCGGTTGAGAGGAGGAGGCAATCAAAGCAGGTTCGATTGTGGGTACCCAGGGTTCGAACTTTCCTGCAACATCAAGAACCAAGCGTTGCTTACTCTCCCAAGAACCGGGGTATTTGTTGTGAATAAAATCTCCCTCGAGGATCAAGAGGTTTATGTTAACGACCCTGAAGGGTGCCTTCCCAGACGGTTCCTGCGTGGGTTCCACTTTGAGGGCTCACCATTCCAATTTGGGGACATTTATAGACGCGTGAATTACTCTTTCCTCAATTGCTCCTCCAATGTAACACACCCGTATGGGATTCGTATAAACCCAATAAGTTGCCTAAGCAAAAATGATAATTATTCGGTGATAGCTATTCCTATTGGCTTTACTCCGCTGTGGGCTTCATCGTGCCAGATCATTTCCTCAGCTTTGGTTCCTATTGAATATCAATTTACGAGACCCCTATACTGGACAGATTATTACGCTGATATCCGGCTGCAATGGTACAACCCAAACTGCACAACTTGTGTAGAGAATGGCGGTCGCTGTGGCTTCGACGATACCAGTTTTCGGATTACTTGTTACAATCTTCCAAGCCAAGGCCAAGGTATTTCGAGGAAAGCCAAGACTGCCATCACCGTAGGACTCGGAATACCTGTATTCCTATGCGTTATCGGGCTTGCATGTTTCTTTTGCGGTAAGATTAAAACGCACGGCGAACGACGGGAAGTGAGCACAGAATTTTCAACATTAATCATCCCACATACTCCCATTTTAGTAATGGGCCTCGATGAGTCTACTATTGAAAAATATCCCAAAACCCAGCTTGGTGAAAGTGGGCGATTACCTAAGCCCAATGACAATACTTGTGCTATATGTCTCTTTGAGTACCAGCCCAAGGATACTTTAAGAACTATACCCGACTGCAATCATTATTATCATGCAAGTTGCATTGACGGATGGCTCAAGATGAATGCTACGTGTCCTTTGTGTCGAAAGTTACCAGAGCGACCCTTCTTCCATACCTCTTCTTTTTCTTCACCTTCAACTTCTGTATAA 1251 0.438 MNPTYQNLALAHISCFSSQILYVEKMATLAPFLLIFSMFMLLPHSITITKAQVCESTSCGSGGVSIEFPFRLRGGGNQSRFDCGYPGFELSCNIKNQALLTLPRTGVFVVNKISLEDQEVYVNDPEGCLPRRFLRGFHFEGSPFQFGDIYRRVNYSFLNCSSNVTHPYGIRINPISCLSKNDNYSVIAIPIGFTPLWASSCQIISSALVPIEYQFTRPLYWTDYYADIRLQWYNPNCTTCVENGGRCGFDDTSFRITCYNLPSQGQGISRKAKTAITVGLGIPVFLCVIGLACFFCGKIKTHGERREVSTEFSTLIIPHTPILVMGLDESTIEKYPKTQLGESGRLPKPNDNTCAICLFEYQPKDTLRTIPDCNHYYHASCIDGWLKMNATCPLCRKLPERPFFHTSSFSSPSTSV 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00045 416 ProSiteProfiles Zinc finger RING-type profile. 354 396 IPR001841 -
Bach4g00045 416 SUPERFAMILY RING/U-box 348 399 - -
Bach4g00045 416 SMART ring_2 354 395 IPR001841 -
Bach4g00045 416 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 32 399 IPR046948 -
Bach4g00045 416 Pfam Wall-associated receptor kinase C-terminal 227 259 IPR032872 -
Bach4g00045 416 Pfam Ring finger domain 352 396 IPR001841 -
Bach4g00045 416 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 323 400 IPR013083 -
Bach4g00045 416 Pfam Wall-associated receptor kinase galacturonan-binding 54 124 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00045 Bach-Chr4 307847 309365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00045 52 399 C3H Transcription Factor Family AT2G46495 33.898 4.08e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00045 - - lja:Lj4g3v3004070.1 401.364