Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00044 GTCGATGCCGAAATTAACATATCAAGACTCTATTCCTACCCTTCCCGGCCGTTTCCAGATTCGATTGCTCTTCCTAGAACATGGCACCCTTGGCGGTCTTGTATTTATCCTGTATCTCTCTGTTCCTTCTTCACAGTCACAGAGCGACTAGCTCTCAAGACTGTAATAATCATGATAGCGTATCTTGCTCGAGCGATGAAGTTGCTATTGAGTTTCCGTTTGGTTTAAAAGAAGACAATCAAAATCAAAGTAGCCGTGGATGTAGCTATCCTAGGTTCCAGCTTTCATGTGACAAGCAGGGGCAGACAATTGTTACCTTCCCCTATTCCGGAGATTTTGTTGTGAGATACATCAATTACGAGGATCAAACCATTCAGGTCAACGACCCCGCTCACTGCCTCCCAAAACGCTTCTTGCACAAAGGCTTCAATCTTTCGGACTCCCCATTCGAGCTTGACCAATTCTCTTATAATTTTTACAACGTATCTTTCCTTCGTTGTCCATCCAACATAACAGAGTCATCCCCTCTCGTAATTCCTTGCCTGAGTGATCCCAGCGACAACGACAACGACAACAACTACTCTGTCATAGCTACATGGCCGCCTCTTATTCCACCGGTGTTTTCCGAATCGTGCCACGTGATTTCTACTGATGTTTTCCCGATTTCAAATTCGGCCATTTGGCCCTTCTGGCCCGATCTTACCAGTGATATCCAGTTGATGTGGAGGGACCCTGGTTGCGGAGGCTGTGCAGCGCGTGGCCAACACTGTGGCTTTGTCAGGGACACCGGTCTTCAAGTTGGATGCTTTCCGAGACCCCATAGCGGAGGTCTTTCAAGAAGTGCCAAATATGGGCTTAGCATAGGACTGGGAGTACCTGGACTCTTGTGTTTGATTGGGCTTTTATGTTGTAAGTGCAAGAAGGTCAGGACATCATCTGCTCAGCATCGCCGTCCCAGCACAGAATTTCCTGACACAATTGCCCTTCAACCTTACCGTTTTGTAATGGGGCTTGATGGGCAAACAATTGAAAAATATCCAAAGACACATCTTGGTGAAAGCGGACGGTTACCAAGACCCAATGATAATACCTGCTCAATATGTCTTTCTGAATATCGGCCCAAGCAGACGTTAAGGACTATACCGGAGTGCAACCATTACTTTCATGCCATCTGCATCGATGAGTGGCTCAAGATTAATGCTACATGCCCTGTGTGTCGGAATTCGCCAACGCCTTCCTTTGCTCTATCCTCTTCATCTTTCTCTCCCTCCTCTACTTCATCTTCCATGTAGACATCCCCAATGTATATATACTTTCCCCTTGATTCGCATTTAGTTACTGTATATCCAACATGTAATTTTCATATTTTAA 1371 0.4573 MAPLAVLYLSCISLFLLHSHRATSSQDCNNHDSVSCSSDEVAIEFPFGLKEDNQNQSSRGCSYPRFQLSCDKQGQTIVTFPYSGDFVVRYINYEDQTIQVNDPAHCLPKRFLHKGFNLSDSPFELDQFSYNFYNVSFLRCPSNITESSPLVIPCLSDPSDNDNDNNYSVIATWPPLIPPVFSESCHVISTDVFPISNSAIWPFWPDLTSDIQLMWRDPGCGGCAARGQHCGFVRDTGLQVGCFPRPHSGGLSRSAKYGLSIGLGVPGLLCLIGLLCCKCKKVRTSSAQHRRPSTEFPDTIALQPYRFVMGLDGQTIEKYPKTHLGESGRLPRPNDNTCSICLSEYRPKQTLRTIPECNHYFHAICIDEWLKINATCPVCRNSPTPSFALSSSSFSPSSTSSSM 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00044 403 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 383 IPR046948 -
Bach4g00044 403 SMART ring_2 338 379 IPR001841 -
Bach4g00044 403 SUPERFAMILY RING/U-box 332 385 - -
Bach4g00044 403 CDD RING-H2_EL5-like 338 380 - -
Bach4g00044 403 ProSiteProfiles Zinc finger RING-type profile. 338 380 IPR001841 -
Bach4g00044 403 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 306 385 IPR013083 -
Bach4g00044 403 Pfam Wall-associated receptor kinase galacturonan-binding 28 102 IPR025287 GO:0030247
Bach4g00044 403 Pfam Ring finger domain 336 380 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00044 Bach-Chr4 304443 306555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00044 22 386 C3H Transcription Factor Family AT2G46495 35.389 1.52e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00044 - - gmx:100810240 365.925