Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00008 ATGTCTTCATCTTGTTCATCGTCGCTTTTGTGTTTGGGGCAAGAAGGCTCACCGGCACTTGAGCAGAATTTCCAATTCATTGTGCAGAGCTGCTCCGAGTGGTGGGTGTACACCATCTTTTGGCAAACTAGCAAAGATGGAGATAGCCGTGTATTATTACATTGGGGCGATGGCCACTTTCGTGGTAGCAGAGAGTTAATGTCCAAAGGCAATGCCATCACCACCATCAGTAGCAAGGAGCACTACCCAAGCAATACGCTAGTTCCCAACGACAATGGCGCTTATGGCTACATGGACATGGACAGATTGGTGGCCAATGGCCATGTAACTGCCTCTGAATGGTTTTACACATTATCCATGACACGATCGTTTGGCGCAGGTGATGGTACCATAGTTGATCGTGCTTTCAGCTCAGGTACTCATATTTGGTTGGTTGGACTGAATGAATTTCAGTTGGAAGTGGAAGAATGTGATAGAGTTAGAGAAGCTCGTAGCCATGGCATCCAAACTTTGGTATGCATACCCACTGCAACTGGAGTGCTTGAGCTGGGTTCTTCGGACTTGATCAAGCAGGATTGGAGCCTCGTTCGATTAGCCAAGTCAGTTTTTATGTCTGCAACTCCTTCTCATCATCATCAGGCTGTTAACGCAGCAGTAGGAGTTTCCCGTAGTCCTCCTCCCTTTGTAAGTACTGCAGTGAGTGTCCCCTTTCTGCAGCATAACATAAAGGAAGAGAAAAAGAAAGAGATCATGTTAAAACACAACAAGAAACAGAAAAAGAAGACGATGGAGATGAGTAGTAGTAGCATACATGATCAGGAGAATGGATCTTATTCCTCAGATTCAGATGAGGATACTCCACTGGGGAGGAGAGGCAGATCTAGAAAGGCACCATCAGAATTGCCTCTGAATCACGTGGAGGCAGAAAGGCAGCGACGAGAGAGGCTTAATCAAAGATTCTATGCTCTCCGTTCTGCTGTCCCCAACGTATCCAAGATGGACAAAGCTTCCGTTCTTTCAGATGCTGTGGCCTACATCAATCAACTAAAGGCCAAAATTGAGAAGCTTGAGTTCAAGGTGAAGTTCCACAATCACAATCACCATCACCAATATCAACCCAAACATGAACATGAACCTTCTTCACGGTCGTCACAGCATTTCTCAACTAGCAGTACTGTTCCTGTCCCCAAAAACAATATTTCTACTAATACCCTGGGTGTTGAGGTCAAGATCATGGGCTTGGATGCCATGATAAGGGTTCAGTGCCTCGATGTAAATCACCCAACTGCAAGGTTGATGGATGCTCTAAGAGATCTCAATTTACAAATTCACCATGCCAGCATATCTAGCGTCAAAGACCTCTTGCTACAAGACGTTGTGGTTAGGATTCCTGATGACCTCATGACCGAGGAGGTAATGAAAAGTGCCCTTCTACAAAGGTTGCAGAACTGA 1452 0.4552 MSSSCSSSLLCLGQEGSPALEQNFQFIVQSCSEWWVYTIFWQTSKDGDSRVLLHWGDGHFRGSRELMSKGNAITTISSKEHYPSNTLVPNDNGAYGYMDMDRLVANGHVTASEWFYTLSMTRSFGAGDGTIVDRAFSSGTHIWLVGLNEFQLEVEECDRVREARSHGIQTLVCIPTATGVLELGSSDLIKQDWSLVRLAKSVFMSATPSHHHQAVNAAVGVSRSPPPFVSTAVSVPFLQHNIKEEKKKEIMLKHNKKQKKKTMEMSSSSIHDQENGSYSSDSDEDTPLGRRGRSRKAPSELPLNHVEAERQRRERLNQRFYALRSAVPNVSKMDKASVLSDAVAYINQLKAKIEKLEFKVKFHNHNHHHQYQPKHEHEPSSRSSQHFSTSSTVPVPKNNISTNTLGVEVKIMGLDAMIRVQCLDVNHPTARLMDALRDLNLQIHHASISSVKDLLLQDVVVRIPDDLMTEEVMKSALLQRLQN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00008 483 Gene3D - 294 366 IPR036638 GO:0046983
Bach4g00008 483 MobiDBLite consensus disorder prediction 268 283 - -
Bach4g00008 483 Pfam Helix-loop-helix DNA-binding domain 304 350 IPR011598 GO:0046983
Bach4g00008 483 Coils Coil 346 366 - -
Bach4g00008 483 MobiDBLite consensus disorder prediction 366 398 - -
Bach4g00008 483 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 300 349 IPR011598 GO:0046983
Bach4g00008 483 MobiDBLite consensus disorder prediction 284 310 - -
Bach4g00008 483 MobiDBLite consensus disorder prediction 246 310 - -
Bach4g00008 483 CDD ACT_UUR-ACR-like 430 483 - -
Bach4g00008 483 SMART finulus 306 355 IPR011598 GO:0046983
Bach4g00008 483 MobiDBLite consensus disorder prediction 383 398 - -
Bach4g00008 483 PANTHER MYC 16 480 IPR045084 GO:0003700|GO:0006355
Bach4g00008 483 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 203 IPR025610 -
Bach4g00008 483 ProSiteProfiles ACT domain profile. 417 483 IPR002912 -
Bach4g00008 483 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 301 376 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00008 Bach-Chr4 94403 95854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00008 1 481 EF-hand Containing Proteins AT5G46830 30.426 5.12e-56 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach4g00008 bHLH-MYC_N 1.8e-41 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00008 - K13422 cave:132176170 398.667