Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02515 ATGGAACCAAAACGACGAGGTCAGGAGTATGTCAAGTGCAACACCAGTAGTACACCGAGGAGGCTGAAAGCATTAGATGGCCGTTCACTTGGTCCTGATGAAGAGCCACCTGTAATTCCTAATCTCTTAAATGGAAGAGCAATAAAAAATAATTCTTTGTCCTTGCTTTCTACTCAAGAACAAGAAAAGAAAGCAGTATCAGTGGAAACTGCTAATGTAGAGGACAAACCTGTTTCAAAGGTTATGATACGTAGTCAGACAAATAGAATAAAAAAGCCTGCAAAATTTGATCCCCTGGAAGAATCCTTGGTTGTGGTTTCTAGTTGGGATGAGAGCTATTCCTGCTCCTTAATTAAAAAAAAGAGAGCTATTCCTGCGTTGATAAACCTTTGCGTGACCATCTCAATCGCCGGAAAACATATTGCAAAGATGGAAAAGGTTGCTGCAGCTCCCATTTTCGTACACCAGTCCCTCTCGAATCGATTTGGTGAGACACCTGCCATGGCCAAGAAGAGCGATCTTACGTACGCAACTTCGCCCAATTTTCTTCACCAACAACTACAAAACCCTATCTATAACTGGAACCAGAAGGACTGGGACTGGGACAGTGTGAGATTCGTGGGCAAACCCCTGGACACAGAAATACTCCGTCTGGGGACTCCAACTACAACACCCATAATCACAAGGACTACTAGCACTTCAGCAGACCAAACCAAGAAAGAAGAACGCTCTTCTAATGTCAACAAGACCCCCGGTGTGGATGATGAAGAAGAAAATCTGCGCTTGAATCTCGGTCGTGGCTTGGGCTTCAGTCACACGGACGAGCCACGGCCTAACAAAAGCGTGAGTTCGGACTCGCCCGCCGGAACCTCGTATCCCATGTGTCAGGTGGATAACTGCAAGGAGGATCTCTCCAATGCTAGAGACTATCACCGCCGACATAAAGTTTGTGAGGTTCACAGCAAATCTTCTAAAGTGCTCGTGGCCAAGCAAATGCAAAGGTTCTGCCAGCAGTGTAGCAGATTTCACCCTCTGTCGGAATTTGACGAGAGGAAGAAAAGTTGTAGATGGAGACTTGCTGGGCATAACCGTCGAAGAAGAAAAACCCAACCAGAAGATGTTTCCTCTCGGAACTTAATTCCTGGAAACCAGGATAATGCTACAACTGGCAACTTGGATATTGTCAATTTGTTGACTGCAATAGCTCGTGCACAAGGGAAGTTTGAGGAAGGAACCAAGATTTGCTCACAACTTCCGGATGGAGACCAGCTTGTTCAGATTGTCAATTGGATACATTTGCCAGCTGAACTCGCTGCAAAGTTGCCCAATGTTAGAAATTTCGATGGTAAAAGTATTGGGCCAATTTCTTCAGATCATCATGACAAATTAAACCGAGATACCTTGTCCCCATCAACTATGGATTTGCTTGCTGTTCTTTCAGCCACTTTATCAGCACCTGCTCCTGATGCCCTTGCATTTCTGTCTCAAAACAGTAGCGAGAGTAGTGATAAAGAGAAGTCTAGGAGCAGTGGAGCGGACCAAATTATGGAGCCAAGTTTACAAACTAGACAACCCATAGAATTTACTTCAGTTGGAGGAGAAAGAAGCAGTAGTAGTTACCAGTCTCCAATGGACGATTCAGACTGCCAAGTTCAAGAGACTCAAATTAATTTACCATTGCAACTATTTGGATCCACTCCAGAAGATGAAAGCCCGCCCAAACTGGCATCTTCAAGGAAGTATTTCTCATCTGACAGCAGTAATCCCATTGAAGAGAGGTCACCGTCATCTTCCCCTCCATTAGTGCAGAATAAATTCCCGTTGAAGGGTGTGGCTGGAGGTGTCAAAGCTGAGAAAATTTCAATTGGAAGAGACTTAAGTGCAAATGAGGAAGCTAGCCAAAGTCACGATTCTGGGTATACATCTTCGGGCTGTGGTCATTCGCCTCCCAGTTTGAACTCAGACGCACGGGTTCGTACTGGGCGAATAATGTTTAAACTATTTGACAAGGATCCTAGCCATTTCCCAGGAACACTGCGAATGCAGATTTACAATTGGCTTTCTAATAGTCCATCAGACATGGAGAGTTACATAAGGCCTGGTTGTGTGATCCTATCAGTTTATGCTTCAATGTCTTCTGCTACCTGGGAGCAACTAGAAGAAAACTTCCTTCGACGTGTTCATTCTTTAATTCAAAGTTCAGGTTCTGATTTTTGGAAAAATGGAAGGCTTTTAGTTCATACTGGCAGTCAGTTAGCATCACATAAAGACGGAAAGACTTGCTTATGCAAACCGTGGAGAACATGGAGATCTCCTGAATTGATATTGGTATCCCCTTTGGCAATTGTAGGTGGACAAGAAACTTCTCTTTCATTGAAGGGTAGAAATCTGTCGACTCCTGGCACCATGATTCATTGCACAAATATGGGTTGTTACATATCGGAGGAAGTTATTGGATCTGAATACCCTGGTAGATCCTATGAAGAAATAAAATTGGATGGTTTTAAAGTTCACAATGTGTTTCCTAGTGTTCTTGGTCGCTGTTTCATAGAGGTAGAGAATGGTTTCAAGGGTAACAGTTTTCCAGTGATAATAGCTGAAGCTAACATTTGTAAGGAATTGAGACTACTTGTGTCTGAGTTTGAAATGGGGGATTGGCTGTCGAAGGGATCATTGGAGATGCTAAATGCGATTCAACTCTTAAACCAAGCTGTGAAAAGAAGGTATATCGACATGGTTGCTTTGCTCATCCAATACTCAATTCCTAGCAAGAATGATACATCCAGGAAATATTTATTTCCGCCTAATCTTGAGGATTCTGGTGGTATTACACCCTTACCCTTACATTTGGCTGCTTGCACGTCTGGTTCTGAGGGTGTGATTGATGCTATAACAAATGATCCCCTGGAGATTGGATTGAAGTGCTGGGAAAAACCCTCATGGATGCAAATGGGCAGACTCCACATGCCTATGCCTTCATGA 2982 0.4359 MEPKRRGQEYVKCNTSSTPRRLKALDGRSLGPDEEPPVIPNLLNGRAIKNNSLSLLSTQEQEKKAVSVETANVEDKPVSKVMIRSQTNRIKKPAKFDPLEESLVVVSSWDESYSCSLIKKKRAIPALINLCVTISIAGKHIAKMEKVAAAPIFVHQSLSNRFGETPAMAKKSDLTYATSPNFLHQQLQNPIYNWNQKDWDWDSVRFVGKPLDTEILRLGTPTTTPIITRTTSTSADQTKKEERSSNVNKTPGVDDEEENLRLNLGRGLGFSHTDEPRPNKSVSSDSPAGTSYPMCQVDNCKEDLSNARDYHRRHKVCEVHSKSSKVLVAKQMQRFCQQCSRFHPLSEFDERKKSCRWRLAGHNRRRRKTQPEDVSSRNLIPGNQDNATTGNLDIVNLLTAIARAQGKFEEGTKICSQLPDGDQLVQIVNWIHLPAELAAKLPNVRNFDGKSIGPISSDHHDKLNRDTLSPSTMDLLAVLSATLSAPAPDALAFLSQNSSESSDKEKSRSSGADQIMEPSLQTRQPIEFTSVGGERSSSSYQSPMDDSDCQVQETQINLPLQLFGSTPEDESPPKLASSRKYFSSDSSNPIEERSPSSSPPLVQNKFPLKGVAGGVKAEKISIGRDLSANEEASQSHDSGYTSSGCGHSPPSLNSDARVRTGRIMFKLFDKDPSHFPGTLRMQIYNWLSNSPSDMESYIRPGCVILSVYASMSSATWEQLEENFLRRVHSLIQSSGSDFWKNGRLLVHTGSQLASHKDGKTCLCKPWRTWRSPELILVSPLAIVGGQETSLSLKGRNLSTPGTMIHCTNMGCYISEEVIGSEYPGRSYEEIKLDGFKVHNVFPSVLGRCFIEVENGFKGNSFPVIIAEANICKELRLLVSEFEMGDWLSKGSLEMLNAIQLLNQAVKRRYIDMVALLIQYSIPSKNDTSRKYLFPPNLEDSGGITPLPLHLAACTSGSEGVIDAITNDPLEIGLKCWEKPSWMQMGRLHMPMPS 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02515 993 ProSiteProfiles Zinc finger SBP-type profile. 292 369 IPR004333 GO:0003677
Bach3g02515 993 MobiDBLite consensus disorder prediction 235 262 - -
Bach3g02515 993 MobiDBLite consensus disorder prediction 362 385 - -
Bach3g02515 993 FunFam Squamosa promoter-binding-like protein 14 286 356 - -
Bach3g02515 993 MobiDBLite consensus disorder prediction 222 290 - -
Bach3g02515 993 Pfam SBP domain 295 368 IPR004333 GO:0003677
Bach3g02515 993 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 209 882 IPR044817 GO:0003677
Bach3g02515 993 MobiDBLite consensus disorder prediction 626 654 - -
Bach3g02515 993 SUPERFAMILY SBT domain 293 373 IPR036893 GO:0003677|GO:0005634
Bach3g02515 993 MobiDBLite consensus disorder prediction 512 564 - -
Bach3g02515 993 MobiDBLite consensus disorder prediction 1 38 - -
Bach3g02515 993 Gene3D - 286 356 IPR036893 GO:0003677|GO:0005634
Bach3g02515 993 MobiDBLite consensus disorder prediction 276 290 - -
Bach3g02515 993 MobiDBLite consensus disorder prediction 627 654 - -
Bach3g02515 993 MobiDBLite consensus disorder prediction 577 603 - -
Bach3g02515 993 MobiDBLite consensus disorder prediction 494 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02515 Bach-Chr3 31056022 31062021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02515 863 976 SBP-box Gene Family AT1G20980 49.580 1.50e-23 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach3g02515 SBP 4.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02515 - - qsa:O6P43_016408 946.421