Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02509 CTGCTCTGCTCTTCACTGAAAATAACAAATGAGTCTGCTTCGATTTCGATCCCTTGATGAATATTTCTCTCCCTTCTCTTTTATATTTCCGCTTCCGCCTATAAACGACGACATCCACAATTCCATAAGGAATCACTGATTTTCATTTTCCTCGTCCTTTTCTGCTTCTATTACCTTACTTTTGTATACTACTACTAGTACTACAAATTAAGTATCCCTTCCTGATTCTTTTACACCACAACCTTTTTACTCCATCATCATAATCCTTTTCCTCATACTCTCTCTCTTCTCCCTTTGCCATCCAATATCACCACCGACTTTACGAATTCCTGTCACCCCGTCCCTTCCCCACCTCAATTCTAGGGTTTTCTCTTTTTCTTTTTTTTTTTTGAAAAAAATTCCTTTTATATCTACTTTTTAGTCTCTATTTTAGTCCTTTATCCTTATTTAGCTGATCGCTGTACCCTTCCATTTTTTTTTTTCCTCCTTTCACTTAAAAAACTTGTATTCTCTGTTGTCCGAATCGCAGAATTTCGACGGATTCCCAGTATATTTCTTCATAATCTTAAGGTTTTTCTGCTTTTTTTTCTTTTCTTTTCCCTCCCTTCTTTTCCTTTCTGTGGTGTCTCTTGAGTGATGTGGTTACGTGTCTATGCGCTGGTGTTGGTGTTTAATCTTTCAGCATAGTGAATCTATCTGGCTACCAATCTTTCTGTCTGTTTGTTGTGGTACAAGTGTGTGTGATTCATGGCATACCCGCCGATTCAGGGTCCAAGCCCAGGATCGAGTTCAAGTTCCGGCTTTCAATTATTGAACTCTCCTTTCGGTGATACCACTTATACCAAAGTCTTTGTTGGGGGATTGGCGTGGGAAACTCAGAGCGAAACTATGCGACGCTACTTCGAGCAGTTCGGCGAGATTCTGGAGGCCGTTGTAATCACTGATAAGAATACCGGGAGATCCAAGGGCTATGGTTTCGTGACTTTCCGGGATCCTGAAGCTGCTAGGAGAGCCTGTGTTGATCCAACTCCCATCATTGATGGTCGGAGGGCAAATTGTAACCTCGCTTCACTTGGGCGCCCACGACTACCTCTGCCTTATGGACGTTTGAGACCTCCCTCCCCTTACATTGGAAGTTTGCAATCAACACGAGGTGCTTATGTTGGAAATTTTGGTTACCATCAGCCACTTTCTTACAGCTATCAACAAGGGTTGGTTTACCCTCCTTATGGGTATACGTCATATGGACCTGAATACATCTACCCACAGGGTTTGTATAACCCATTTATGGGTCAGCAGTATCTTCAGATATATGGAATGCCTGGGACTGTGAATACAACTCTGTATCCTTATGGGCAATTCAGTCAAGCCATTCCTAGTGGTCATGCTTATACTGCAATGCAGGGTTATGCGGTACCTGGTCATCAGATTGTGCCCTTCGATGGATCGAACGTTAGTGCCATAACAACTTCACCCATGCCTGCCATTCAAGTACCATATCCTAGCGGAATTGCTGCACCAGCTCCAGGCCAACCCCAATTCATTGTTCCTGCTCCTTCTCCGCAGTTTATGCAAGGTAGCGGTCCTGACCAAACAGTTGGCCTTGCAAGTTATTTATTTTGCATTCTAGAGGTCATATATAGTCATGCTCACCAAGAAGTTGTGTCTGAGTCGCTCCAGATGGTGGAGAAGGAAAGTGGAAGATGCAGGGGCTGCTTTTCAATTTAG 1728 0.4317 MAYPPIQGPSPGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAARRACVDPTPIIDGRRANCNLASLGRPRLPLPYGRLRPPSPYIGSLQSTRGAYVGNFGYHQPLSYSYQQGLVYPPYGYTSYGPEYIYPQGLYNPFMGQQYLQIYGMPGTVNTTLYPYGQFSQAIPSGHAYTAMQGYAVPGHQIVPFDGSNVSAITTSPMPAIQVPYPSGIAAPAPGQPQFIVPAPSPQFMQGSGPDQTVGLASYLFCILEVIYSHAHQEVVSESLQMVEKESGRCRGCFSI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02509 326 PANTHER BOULE-RELATED 13 248 - -
Bach3g02509 326 SMART rrm1_1 33 105 IPR000504 GO:0003723
Bach3g02509 326 SUPERFAMILY RNA-binding domain, RBD 31 145 IPR035979 GO:0003676
Bach3g02509 326 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 26 113 - -
Bach3g02509 326 CDD RRM_RBM24_RBM38_like 32 107 - -
Bach3g02509 326 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 89 IPR000504 GO:0003723
Bach3g02509 326 Gene3D - 27 111 IPR012677 -
Bach3g02509 326 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 109 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02509 Bach-Chr3 31004979 31009501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02509 21 108 C2H2 Transcription Factor Family AT2G19380 43.182 8.04e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02509 - - gmx:100782606 503.442