Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02507 ATGACTTCTACTATTACCAGTAGAGAGCCACAACCATTCATGGTGGGGCTGCAGAAAACTGTGGTGTTGCCATCAAATTCACCGCCGGTGCCTGTAGCCGTGGTGCAAAACATGCGCTTAGCATATGGTGCTGATGGCACAGCTGTCTATAAGCCCGTTTCAGCGCCTTCGCCATCGCAAACCTATCAGCCCTCAGCCGCCGTCGCTGGAAATATTAATGACGGTACCGGAAGCGGGGGTGAAGGCGGGTCAATGGTCTCCCAGGCGCAACCTCAGGGAACTAACGTGAATATGGGCAGCGAACCGCTGAAGAGGAAGAGAGGGAGGCCAAGGAAGTATGGGCCAGATGGCAGCATGGCATTGGGCACTGTGGCCGTTAACCAGTCCAATGCAAGTGGAGGATTCTCTCCTTCTCCGCCACCTTCGTCACCCCCTTCCTTCAAGAAACCCAGAGGCAGACCCCCTGGTTCAAGTAATAGTAAGAAACAACAATTAGAGTCTCAAGGATCAGCAGGAGTTGGGTTTGCTCCCCATGTTATCACTGTGAGAACTGGAGAGGACGTGTCATCAAAAATAATGTCATTTTCCCAGCATGGTCCAAGGGCAGTTTGCATCTTATCAGCAAATGGAGCCATATCTAATGTTACACTACGCCAACCTGCCACATCTGGTGGAACTGTGACTTATGAGGGTCGATTTGAGATCCTATCACTTTCTGGATCCTTCCTTCTATCAGAAAATGGTGGTCAGCGGAGTAGAACTGGTGGATTAAGTGTGTCTTTATCTGGACCAGATGGCCGTGTTTTGGGTGGTGGTGTGGCTGGTCTTTTAACTGCTGCTTCCCCTGTTCAGGTAGTTGTAGGGAGCTTCATCGCTGATGGTAGCAAGGAATCAAAGTCAGGGAACCCAATGGAAACTTTATCTGCCCCACAAAATGTTGCCCCTAGTAGTGGTCTTGCGGTTGCAGTGCAAAGCAGCTCACCTTCACATGGTACTCTTAGTGAGTCATCAGGTGGCCCTGGGAGCCCACTTAATCAGAGCACTGGAGCCTGCATTAACAGTAACCCACAAGGCCTTGCAAGTATGCCATGGAAATAAAATCCCCCTTTTTTATTTTCACAAAATTAGTTTGTATAATAGGTTTGTGGACTCTAGTGTGTGTCTCTAGCTCTATCAAGCATTTAAAGAGACACATATGTAACATTAGCTTTGTGTAATATTAATGCAAGGGATAGGATATGTAGTATGCTTTCCAAGTATGACATCATTGGCTACTGCTGCTACCTGAGAAAGACCACTACCTGATCTAGATGGTCTTCTGGGGTTCTGCACTTAATTGAGGCAGAGAGGTTTAGGGAAGGATGTGATAAAGGAGCAAGTATTTAGGATAAGTTTGTGATTAGTTTGTCTAGTCATGTCTTAGCTGTTATCTGTTGTTGACCTAGGAGCAAGTATTTAGGATAAGTTTGTGATTAGTTTGTCTAGTCATGTATTAGCTGTTATCTGTTGTTGACCTGTAATCAAACTATCTCCTTGTTAACCTTGTGTAATCAATCAATTAAGGAGTTAGATGGTA 1576 0.4619 MTSTITSREPQPFMVGLQKTVVLPSNSPPVPVAVVQNMRLAYGADGTAVYKPVSAPSPSQTYQPSAAVAGNINDGTGSGGEGGSMVSQAQPQGTNVNMGSEPLKRKRGRPRKYGPDGSMALGTVAVNQSNASGGFSPSPPPSSPPSFKKPRGRPPGSSNSKKQQLESQGSAGVGFAPHVITVRTGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGSKESKSGNPMETLSAPQNVAPSSGLAVAVQSSSPSHGTLSESSGGPGSPLNQSTGACINSNPQGLASMPWK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02507 365 MobiDBLite consensus disorder prediction 122 136 - -
Bach3g02507 365 Pfam AT hook motif 148 159 IPR017956 GO:0003677
Bach3g02507 365 Pfam AT hook motif 104 115 IPR017956 GO:0003677
Bach3g02507 365 CDD DUF296 177 290 IPR005175 -
Bach3g02507 365 ProSiteProfiles PPC domain profile profile. 171 314 IPR005175 -
Bach3g02507 365 MobiDBLite consensus disorder prediction 137 151 - -
Bach3g02507 365 Gene3D - 177 308 - -
Bach3g02507 365 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 76 355 IPR039605 GO:0003680
Bach3g02507 365 MobiDBLite consensus disorder prediction 294 365 - -
Bach3g02507 365 SUPERFAMILY AF0104/ALDC/Ptd012-like 175 292 - -
Bach3g02507 365 MobiDBLite consensus disorder prediction 156 170 - -
Bach3g02507 365 MobiDBLite consensus disorder prediction 54 173 - -
Bach3g02507 365 SMART AT_hook_2 104 116 IPR017956 GO:0003677
Bach3g02507 365 SMART AT_hook_2 148 160 IPR017956 GO:0003677
Bach3g02507 365 MobiDBLite consensus disorder prediction 54 99 - -
Bach3g02507 365 MobiDBLite consensus disorder prediction 295 365 - -
Bach3g02507 365 Pfam Plants and Prokaryotes Conserved (PCC) domain 177 290 IPR005175 -
Bach3g02507 365 FunFam AT-hook motif nuclear-localized protein 1-like 177 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02507 Bach-Chr3 30992913 30996579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02507 37 365 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 58.754 3.86e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02507 - - vvi:100263332 414.846