Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02491 ATGGCCTCGAGCTGGGATGCAAGTAATGATCCTGGCAGCCAGTCAGATGAGAGTTATTATTTTGATAGGTCGCACATTGAGCCTATCTATGATGCCTTCGTATGTCCTCTAACAAAGCAAGTTATGCGCGATCCTGTTACCTTAGAAAATGGTCAGACTTTCGAACGTGAAGCAATTGAAAAGTGGTTCAAGGAATGCAGGGAGAGTGGACGCAAACCCGTTTGCCCTTTGACATTAAAAGAACTAAGAAGCACCGAACTGAATCCCAGTATAGCTTTGCGTAACACCATTGAAGAGTGGACTCTCAGGAATGAATCTGCACAGTTGGACATGGCTCGGCGATCATTAAATACGGGAAGTCCAGAAAATGAAGCTCTGCAGGCTTTACGGTACGTCCAACATATCTGCCAAAGAGGTCGGTCCAACAAGCGTGTTGTCCGTGATGCAGGGCTTATACCTATGATTGTTGACATGTTAAAGAGCAGCAGCCGAAAGGTTCGTTCTAGTGCTTTGGAAACTCTTAGAACTGTGGTGGAGGAAGATGATGAGAATAAGGAAATTTTGGCTGAGGGGGACATTGTGCGCACAATAGTGAAGTTCCTTTCCCATGAGCTTTCTAAAGAAAGACAGGAAGCTGTCTCTTTGCTTTATGAACTCTCAAAATCTGAAACCCTGTGTGAGAAGATTGGTTCAATCAATGGAGCTATTCTTATATTAGTTGGAATGACAAGCAGCAAATCAGAAGACCTTTCAACAGTTGAAAAAGCTGATAAAACACTGGAGAATCTGGAGAAGTGTGAGAATAATGTACGGCAGATGGCCGAAAATGGTAGACTGCAGCCTCTTCTGAACCAGCTTCTTGAAGGTCCACCAGAAATTAAGTTGTCCATGGCTGGATACCTAGGTGAGCTCGTTTTGAACAATGATGTAAAAGTCTTTGTTGCTAAAGCTGTGGGTTCATCTCTGATCGAGATCATGAAAAGTGGTAATTTGCAGTCAAGAGAAGCTGCTCTGAAAGCTCTAAATCAGATATCATCATGTGATCCTAGTGCTAAGGTTTTGATAGAGGCTGGAATACTTTCTCCGCTTGTGAAGGACCTTTTTGCAGTGGGTCCTAATCCGCTTCCCATGAGACTGAAAGAGGTCTCTGCTACGATCCTTGCCAATCTTGTCTACTCAGGAGTTGACTTTGATTCCATTCCAGTTGGACCTGATCACCAAACTCTTGTTTCAGAGGAAATAGTTCATAATCTACTCCATCTCATTAGCAACACCGGTCCAGCTATTGAATGCAAACTTCTCCAGGTTCTTGTTGGACTTACTAGTTCTCAAACAACTGTTCCGAGTGTTGTTGCTGCTATCAAAAGCTCTGGTGCCACTATCAGTTTGGTTCAATTCATTGAGGCTCCACAGAAAGATCTGCGGGTAGCTTCCATAAAACTTCTTCAGAATCTGTCCCCACACATGGATCAGGAACTAGCAGATGCACTACGTGGTTCAGTTGGACAGCTCGGTAGTTTAATTAAAGTCATATCAGAAAATATAGGGATCACTGAAGAACAAGCAGCAGCTGTTGGCCTTCTAGCTGATCTACCTGAGAGAGATTTGGGCCTCACAAGACAGATGCTAGATGAAGGTGCTTTTCAGATGGTCATCTCCAGAGTGATTAGTATCAGGCAGGGGGAGATCAGAGGCAACCGCTTTCTGACACCATTTCTTGAAGGGCTAGTCAAAATTCTTGCAAGGGTTACCTATGTGTTGGCTGATGAGCCTGGTGCCATTGCACTCTGTCGTGAGAACAGTCTTGCTGCACTCTTTATTGAACTGCTTCAGTACACTGGACTGGATAACTTACAGATGGTTTCTGCCACAGCTTTGGAGAATTTATCACAAGAATCTAAAAATTTAACAAAATTGCCTGAGGTGTCATCGCCTGGTGTTTGCGCTTCAATTTTTCCATGCTTCAGTAAACAAACTGTTATAACAGGGTTATGTAGGCTCCATCGAGGGATATGTTCATTAAAAGAAACATTTTGCCTCTTGGAAGGGCAGGCAGTCTGTAAGTTGGTAGCTCTACTTGACCACACAAACGTGGATGTGGTTGAGGCGGCCCTTGCAGCCATATCTACTTTGTTAGATGATGGAGTTGATATAGAACAAGGGGTAATGGTGCTGTGTGAAGCAGAGGGAATCAAGCCTATACTTGACGTGTTACTTGAGAAAAGGTCAGACAATCTGAGGAGAAGAGCAGTTTGGGCAGTTGAGAGATTATTGCGGACTGAGGATATAGCCTATGAAGTTTCGGGAGATCAAAATGTGAGCACTGCACTTGTTGACGCCTTCCAGCATGGTGACTATCGAACTCGGCAGATTGCTGAGCGTGCTCTCAAGCATGTTGATAAGATTCCCAACTTTTCAGGAATCTTTCCGAACATGGGATAG 2442 0.4402 MASSWDASNDPGSQSDESYYFDRSHIEPIYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECRESGRKPVCPLTLKELRSTELNPSIALRNTIEEWTLRNESAQLDMARRSLNTGSPENEALQALRYVQHICQRGRSNKRVVRDAGLIPMIVDMLKSSSRKVRSSALETLRTVVEEDDENKEILAEGDIVRTIVKFLSHELSKERQEAVSLLYELSKSETLCEKIGSINGAILILVGMTSSKSEDLSTVEKADKTLENLEKCENNVRQMAENGRLQPLLNQLLEGPPEIKLSMAGYLGELVLNNDVKVFVAKAVGSSLIEIMKSGNLQSREAALKALNQISSCDPSAKVLIEAGILSPLVKDLFAVGPNPLPMRLKEVSATILANLVYSGVDFDSIPVGPDHQTLVSEEIVHNLLHLISNTGPAIECKLLQVLVGLTSSQTTVPSVVAAIKSSGATISLVQFIEAPQKDLRVASIKLLQNLSPHMDQELADALRGSVGQLGSLIKVISENIGITEEQAAAVGLLADLPERDLGLTRQMLDEGAFQMVISRVISIRQGEIRGNRFLTPFLEGLVKILARVTYVLADEPGAIALCRENSLAALFIELLQYTGLDNLQMVSATALENLSQESKNLTKLPEVSSPGVCASIFPCFSKQTVITGLCRLHRGICSLKETFCLLEGQAVCKLVALLDHTNVDVVEAALAAISTLLDDGVDIEQGVMVLCEAEGIKPILDVLLEKRSDNLRRRAVWAVERLLRTEDIAYEVSGDQNVSTALVDAFQHGDYRTRQIAERALKHVDKIPNFSGIFPNMG 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02491 813 SUPERFAMILY ARM repeat 458 801 IPR016024 -
Bach3g02491 813 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 114 IPR013083 -
Bach3g02491 813 CDD RING-Ubox_PUB 30 87 IPR045210 -
Bach3g02491 813 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 150 192 IPR000225 GO:0005515
Bach3g02491 813 Gene3D - 115 317 IPR011989 -
Bach3g02491 813 ProSiteProfiles HEAT repeat profile. 151 185 IPR021133 -
Bach3g02491 813 ProSiteProfiles U-box domain profile. 28 107 IPR003613 GO:0004842|GO:0016567
Bach3g02491 813 Gene3D - 318 487 IPR011989 -
Bach3g02491 813 SMART Ubox_2 32 100 IPR003613 GO:0004842|GO:0016567
Bach3g02491 813 Coils Coil 256 276 - -
Bach3g02491 813 SUPERFAMILY ARM repeat 115 444 IPR016024 -
Bach3g02491 813 SMART arm_5 717 759 IPR000225 GO:0005515
Bach3g02491 813 SMART arm_5 307 346 IPR000225 GO:0005515
Bach3g02491 813 SMART arm_5 139 179 IPR000225 GO:0005515
Bach3g02491 813 SMART arm_5 347 392 IPR000225 GO:0005515
Bach3g02491 813 SMART arm_5 672 713 IPR000225 GO:0005515
Bach3g02491 813 SMART arm_5 589 631 IPR000225 GO:0005515
Bach3g02491 813 SMART arm_5 181 221 IPR000225 GO:0005515
Bach3g02491 813 SMART arm_5 266 306 IPR000225 GO:0005515
Bach3g02491 813 Pfam U-box domain 31 105 IPR003613 GO:0004842|GO:0016567
Bach3g02491 813 Gene3D - 573 803 IPR011989 -
Bach3g02491 813 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 14 809 - -
Bach3g02491 813 SUPERFAMILY RING/U-box 22 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02491 Bach-Chr3 30919054 30922046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02491 2 813 U-box Gene Family AT1G76390 65.111 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02491 - - gmx:100789746 1378.23