Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02489 ATGGAGTGGCAAATAGAGCAAGAAAATGGCGTTGGAGTTGAAGGGCTATACGTTAAAGTGATGACTGACGAGCAAATGGAGGTGCTGAGGCAACAGATCTCTGTGTACGCCACCATATGTGAGCAGCTTGTTGAGATGCACAAGGCCATCACTGCGCAACAGGACCTTGCAGGACTGAGGCTGGGTAACTCCTACTGTGATCCATTGATGGTATCTTCTGGACACAAGATAACTGCCAGGCAGCGTTGGACTCCAACACCCGTGCAGCTTCAGATACTTGAACGTATTTTTGACCAAGGCAATGGGACTCCAAGCAAACACAAGATCAAAGAGATGACCATTGAGCTGGGGCAACATGGCCACATTTCAGAGACAAATGTCTATAATTGGTTCCAGAACAGAAGAGCTCGTTCAAAACGGAAACAATTATTAATAGCTCCCATGCCAAATGATAATATTATAGAATCAGAACTAGAAACGGAAGTTGAGTCTCCCAAAGAGAAAAGGACGAGACCTGAAAGCCTGCAGGTTCATTATCACTTGGACAATATTTCTCCACCCCCAAGGACCAAAGATACATACTTCCACAGCTCTGACATAGGATATGACCAATTGACGAGTAAGATGGAGGTTGAGGGCTGCTATAGTCCTTATTTTCAAGGAGATATACATGATATGAATGGTCAAAGTCCCAATTCACTAATTGGACTGCTTGATTCCATCTAG 726 0.4435 MEWQIEQENGVGVEGLYVKVMTDEQMEVLRQQISVYATICEQLVEMHKAITAQQDLAGLRLGNSYCDPLMVSSGHKITARQRWTPTPVQLQILERIFDQGNGTPSKHKIKEMTIELGQHGHISETNVYNWFQNRRARSKRKQLLIAPMPNDNIIESELETEVESPKEKRTRPESLQVHYHLDNISPPPRTKDTYFHSSDIGYDQLTSKMEVEGCYSPYFQGDIHDMNGQSPNSLIGLLDSI 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02489 241 CDD homeodomain 80 142 IPR001356 GO:0003677
Bach3g02489 241 Pfam Homeodomain 80 140 IPR001356 GO:0003677
Bach3g02489 241 SUPERFAMILY Homeodomain-like 79 142 IPR009057 -
Bach3g02489 241 ProSiteProfiles 'Homeobox' domain profile. 76 141 IPR001356 GO:0003677
Bach3g02489 241 PANTHER WUSCHEL-RELATED HOMEOBOX 13 7 207 IPR044559 GO:0003700
Bach3g02489 241 Gene3D - 81 143 - -
Bach3g02489 241 SMART HOX_1 78 145 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02489 Bach-Chr3 30902776 30903821 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02489 16 175 Wox Gene Family AT4G35550 72.050 1.65e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bach3g02489 Homeodomain 1.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02489 - - var:108342525 319.316