Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02488 ATGGCAATAAATTTAAAATCCCGCCTAAACCCCTGTCTTACATCATCATATCTTACATCCAATACAACATCTCGAGCAACAGCCCGTCCGTCGCTTCTCTCTCTTTTCGAAACCCTGATTTCGATTCACCTTGCTGTTTTCGTCATGAAGGGTGGAAAATCCAAGACCGAATCTAAGAAAGCCGATACCAAGCTTGCTGTGAATAAGAAAGGTGGCCCCGCCACAAAAGCGGGCGGCCGGAAGCCTAGTAAGGGGAAGGCCGCTAAAGACCCTAACAAGCCAAAGAGACCGCCCAGTGCCTTTTTCGTTTTCATGGAGGAATTCCGGAAGCAGTTCAACAAGGAACATCCCGACAACAAATCAGTGTCTGCTGTTGGCAAAGCAGCTGGAGCAAAATGGAAGTCTTTGTCTGATGCTGAGAAAGCACCATATGCAGCTAAGGCCGAGAAACGAAAGGCTGAGTATGAGAAGAGTATGAAAGCATATAACAAGAAACAGGCTGAAGGTCCCAATGCTGCTGAGGAATACGAGTCTGAGAAATCAATGTCAGAGGTCAATGATGAAGATGAAGGAGAAGAAGACGGCAGTGGCGAGGAAGATGATGATGAGTAA 612 0.4673 MAINLKSRLNPCLTSSYLTSNTTSRATARPSLLSLFETLISIHLAVFVMKGGKSKTESKKADTKLAVNKKGGPATKAGGRKPSKGKAAKDPNKPKRPPSAFFVFMEEFRKQFNKEHPDNKSVSAVGKAAGAKWKSLSDAEKAPYAAKAEKRKAEYEKSMKAYNKKQAEGPNAAEEYESEKSMSEVNDEDEGEEDGSGEEDDDE 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02488 203 CDD HMG-box_AtHMGB1-like 95 155 - -
Bach3g02488 203 Gene3D High mobility group box domain 78 179 IPR036910 -
Bach3g02488 203 Pfam HMG (high mobility group) box 94 163 IPR009071 -
Bach3g02488 203 Coils Coil 145 165 - -
Bach3g02488 203 MobiDBLite consensus disorder prediction 181 203 - -
Bach3g02488 203 SUPERFAMILY HMG-box 82 170 IPR036910 -
Bach3g02488 203 MobiDBLite consensus disorder prediction 143 163 - -
Bach3g02488 203 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 94 163 IPR009071 -
Bach3g02488 203 MobiDBLite consensus disorder prediction 57 100 - -
Bach3g02488 203 MobiDBLite consensus disorder prediction 113 203 - -
Bach3g02488 203 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 49 198 IPR031061 -
Bach3g02488 203 SMART hmgende2 93 164 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02488 Bach-Chr3 30896623 30898216 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Bach3g02488 HMG_box 3.3e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02488 K25507 - qsa:O6P43_016371 219.164