Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02484 ATGGGAGATGGTGCTGATGATGCTGTGTCGCCTGGTACCTTGCTGGAAGCTCCACCTGAATCCTCCATGGATTTCGACTACATGGATGAACTTTTCTTAGATGGATGCTGGTTGGAAACCACAGCAGAAGGATCTAACTTCATGATGCAAAATCCTTCTACTTGTAATCCTCTATTTGACCCTTCATTTTCATGGCCTCTCTTGGAAACTAATGGAGTTTGTAGCGTAAGTACATCTCACAATGAAAATCAAGAAGAAAGGCAAAGTCCCTTGTTTAATGAATCCCGGGAAACTCCTTTCAATGCTCAACCAGTTGGACAAGACATAATTAATATTGGAGGAAGCTGTAGTCGGTCTGAATTTCATTCGGTTGAAGGTTCTGAAGTGGTCAGAAGATGGTGGATTCAACCCACACCCACGTCTAATCTAGGCCCTGCATCTTCGGTAATGGAGAGACTAATTAGGGCACTTGTGTATATCAAGGAACTGAATAGAGACAAAGATATGCTTGTCCAAATATGGGTGCCAGTTAATAGAGGGGATAGGCAGATTTTAACAACTAATGACCTTCCTTTCTCGCTTGGAAACACCAGTCCAAATCTTGCAAAATACAGAGAAATCTCTGAGAAGTATCAGTTTTCAGCTGAGGATGACCCCAAGGGTTTGGCAGCAGGACTGCCAGGTCGAGTTTTTAGGGGCAAGGTTCCTGAGTGGACTCCTGATGTTCGATTTTTCAGAAGTGATGAATACCCGCGAGTTGACCATGCGCAAGAGTATGATGTCCGTGGAACTTTAGCTCTTCCAGTCTTTGAGCAAGGTAGTAGGAATTGCTTGGGTGTTATTGAGGTTGTCATGACTACCCAGCAAATCAAGTATCGCTCCCAACTTGAAAGTGTTTGCAAAGCACTTGAGGCTGTTGATCTTACAAGTTCTGAAATTTCAAGTATTCAGAATGTGAAGGAGGTATGCAACAAGTCCTTTGAAGCTGCATTACCCGAGATCCAGGAGGTGTTAAGATCTGCATGTGAAATTCACAAATTACCTTTGGCTCAAACCTGGGTTCCATGCATCCGACAAAGCAAAGAGGGCTGCCGGCATTCAAATGATAATTATTTACGTTGTGTTTCTCCTGTGGATCATGCTTGCTATGTTGGTGATCCGAGTGTACAGGCTTTTCAAGAGGCTTGCTCCGAGCATCACTTGTTAAAAGGTCAAGGCGTTGTTGGAGGAGCTCTTATGACCAATCAACCATGCTTCTCAGCTGACATAACCTCTATGGGTAAGACAGAGTATCCACTCTCTCACTATGCAAGGATGTTTGGATTGCGGGCTGCTGTTGCTATACGTCTACGAAGCATCCATAATAGTAGGGATGATTTTGTCCTAGAGTTTTTCTTGCCCTTGGATTGCGTTGATGGTGAAGAACAGAGGAAGATGCTTACTTCTTTGTCCATGATTATACAGAGGGTTTGCCATAGCTTACGGGTCATAACCAATAATGAATTGGAGGAGGAGACTAGGTTATCAGTTGATGAAGTGATTGTACCTGCAGATAGTGTATCTGCAAGAACTACTACTTGGATGGATCTCCAACAGAGTGGGACGGTTGCCTCATTGTGCGCTGCACAAAAATCAAGTGAAACAATTGGTAGAAAATTTTCTGACTTAAGCCAGCAACAACAAGATTCTATCTTTGATGAGGGTAGCTTGTCAAGTGGGGGTACGAGTAAGACGGGGGAAAAAAGACGGACTAAAGCAGAGAAAACTATCACCTTGCAAGTTCTTCGGCAACACTTTGCTGGAAGCCTAAAAGATGCTGCAAAGAATATTGGCGTTTGTACAACAACTTTGAAAAGGATCTGCCGGCAACATGGGATAAAGCGTTGGCCTTCTCGAAAGATCAAAAAGGTCGGTCACTCCTTGCAAAAACTTCAACTTGTGATCGATTCAGTTCAAGGTGGCTCTGGTGCTTTTCAAATAGATTCATTCTACTCAAACTTTGCGGAACTAGCGGCTCCAAATTTGTCAGGAACCAGCCTGTTGTCTGCTGCAAAGCGAAATGATAATGATAATCCAAATCCATCAACCACAGAGCCCGAACCCAGAATGTTAAGCCCATCAAAATCACCCTCTTCTTCAGGCTCAGGCAGTCGGAGTTCCTTTTCAAGCCATTCCTGTTCCAGCATTTCGGAGCCACATCATCTCACACTCACCCAGAATGTAGCCAGTAGCAAAAATCCTATGGATGGAGAAGATGGCAGTGGTGGTGTGTTGAAGAGAATAAGAAGTGAAGCAAAGCTAAAAGGGTCCAATCTAGATGGAGCAATACACTTGCCAAGATCCCAAAGCCAGGAAGCACTTGGTCAACACCCAAAAATTGAGTTTCTCCGACCCCGCACTGACCAAGTGGCTCATAAGGAGGATGCTTACAAAGTAAAAGTGACATACGGAGATGAGACAACGCGGTTTCGGATGCCAAAGAATTGTGCTTATGAAGATCTACTGGGAGAAATTTCTAGACGATTTAACATCGATGATATGAGCAAATTCGATATTAAGTATTTGGACGACGACAATGAGTGGGTATTACTTACATGTGCAGCTGATCTAGAGGAGTGTATTGATGTTTGTCATTCTTCTCAGAGCCGTACAATCAAACTCTCTCTCCACGTTTCTAATCATCGTATGAGAAGAGAAGTTCATTAG 2706 0.4357 MGDGADDAVSPGTLLEAPPESSMDFDYMDELFLDGCWLETTAEGSNFMMQNPSTCNPLFDPSFSWPLLETNGVCSVSTSHNENQEERQSPLFNESRETPFNAQPVGQDIINIGGSCSRSEFHSVEGSEVVRRWWIQPTPTSNLGPASSVMERLIRALVYIKELNRDKDMLVQIWVPVNRGDRQILTTNDLPFSLGNTSPNLAKYREISEKYQFSAEDDPKGLAAGLPGRVFRGKVPEWTPDVRFFRSDEYPRVDHAQEYDVRGTLALPVFEQGSRNCLGVIEVVMTTQQIKYRSQLESVCKALEAVDLTSSEISSIQNVKEVCNKSFEAALPEIQEVLRSACEIHKLPLAQTWVPCIRQSKEGCRHSNDNYLRCVSPVDHACYVGDPSVQAFQEACSEHHLLKGQGVVGGALMTNQPCFSADITSMGKTEYPLSHYARMFGLRAAVAIRLRSIHNSRDDFVLEFFLPLDCVDGEEQRKMLTSLSMIIQRVCHSLRVITNNELEEETRLSVDEVIVPADSVSARTTTWMDLQQSGTVASLCAAQKSSETIGRKFSDLSQQQQDSIFDEGSLSSGGTSKTGEKRRTKAEKTITLQVLRQHFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGGSGAFQIDSFYSNFAELAAPNLSGTSLLSAAKRNDNDNPNPSTTEPEPRMLSPSKSPSSSGSGSRSSFSSHSCSSISEPHHLTLTQNVASSKNPMDGEDGSGGVLKRIRSEAKLKGSNLDGAIHLPRSQSQEALGQHPKIEFLRPRTDQVAHKEDAYKVKVTYGDETTRFRMPKNCAYEDLLGEISRRFNIDDMSKFDIKYLDDDNEWVLLTCAADLEECIDVCHSSQSRTIKLSLHVSNHRMRREVH 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02484 901 CDD PB1_NLP 811 890 IPR034891 -
Bach3g02484 901 MobiDBLite consensus disorder prediction 1 21 - -
Bach3g02484 901 Pfam RWP-RK domain 589 637 IPR003035 -
Bach3g02484 901 Gene3D - 805 892 - -
Bach3g02484 901 ProSiteProfiles RWP-RK domain profile. 576 657 IPR003035 -
Bach3g02484 901 MobiDBLite consensus disorder prediction 682 731 - -
Bach3g02484 901 PANTHER PROTEIN NLP8 103 892 IPR045012 GO:0003700
Bach3g02484 901 ProSiteProfiles PB1 domain profile. 809 892 IPR000270 GO:0005515
Bach3g02484 901 MobiDBLite consensus disorder prediction 565 585 - -
Bach3g02484 901 SUPERFAMILY CAD & PB1 domains 805 894 - -
Bach3g02484 901 Pfam PB1 domain 810 891 IPR000270 GO:0005515
Bach3g02484 901 SMART PB1_new 809 892 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02484 Bach-Chr3 30861094 30864296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02484 23 896 NLP Transcription Factor Family AT1G20640 47.619 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bach3g02484 PB1 5.4e-20 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02484 - - gmx:100790922 1120.53