Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02452 ATGGATTTCTTTATGCGGAGCTTCTGGAGAAGTTATTCGAAAATCAATTGCGTTCCTTTATTAAACAAACAAGAACTAAAAGCAGAAGAACGTGAGCCTCTGCTGATATTGCGTCAAGTAAACGGCAATCAGATGGCCCAAAAAGAAGTCGTGGCTGATTTTGAAGGTAATTATGGCCGTGTCACAGTTACTGGCAGCAGTTCAATTAGCAAAAACAAACTTGGGGATTCGCATGAAAACTCTTCTGTACAAAGGAAGGAGGATTCGCAGAAGGAGGAAAACTATCAACAGCCCACATATTCAAGAGAGGAAATTCCGAGGTTCAATCGGAATGGTTCATTTCAAGGACACTCATGGAGATCCCATATAAGCAGGACAAAGTCAAGGCTAGTTGACCCACCAAATGAACCATGTGCAAGATCAGATGAATTGAACAACGGAAGACAACCGGAGACAAAGAAAGATAACGATGTGGAGGTGGACGATGTTGAGGACATCCCAGAAGAGTACAAGAGAATAACGTTTAGTCCATTTAGTATACTCCAGTGGATTAGTCTTGCTTCGATACTAGCAGCTTTGGTTCTTAACCTTTGGATTCCAGACATTGGGAGGCTAAAGCTCTGGGACCTTCCACTGTGGCAATGGGAGATAATGATTTTAGCACTAATTTCTGGACGTTTGGTGTCAGGATGGGTAGTTAAGGTGATTGTGCTTTTCGTTGAACGCAATTTCATCTTGCGGAAACGGGTTCTGTATTTTGTGTACGGGTTGAAGAGCGCTGTGAAGAACTGCATCTGGTTGGGTCTGGTTTTACTGGTATGGCACTTCATTTTGAGCAATAAGGCTAAGAAGAAGATGAACGATAAGATTTTGCTTTATGTGACCAAGAGTCTGATATGCCTTTTCGTGGGCACTCTCACATGGCTTCTGAAAACCCTTCTTGTTAAGGTCCTTGCTTTGTCCTTCCACGTCAAAACATTCTTCCAACGAATTCGGGAGGCTCTGTTCGAGCAGTATGTCATCGAAACGCTCTCTGGTCCTCCATTAGTAGAAAATGAAACTGAGGCCAGTAGTGCTCATGGTGATCTTATTATTGGATCAGGGCCCTCAACTCCTATTAGAAGCGCAGCACTGTGGAAGAACACCACAATCAGGAAAAGTAGCAAGTTCTCAAGGTCATTGTCGTCTAGGAACAAGAAGCAAGAAAGAATCCCAATTGACCAGTTGGATAAGTTGAATCGGAGAAATATATCAGCCTGGAACATGAAGAGGATGATCAGTATAATTCGGCAGGGGGCATTTAACACACTGGATGAACAGATACTAAATTCTGACATTGAGGATGACTCTTTGCTGCAGATTAGAAGCGAATGCCAGGCAAAAGAGGCTGCCCGGAAAATATTTCTTAATGTGGCAAAACCAGGATCCAATTACATTTTCCTGCAAGATGTGAGGCAATTTATGCTCGAAGATGAAGCTTTGAAGACAATGGATCTGCTAGGAGCAGTATCTGCAGAACAGGGCAGTAGCAAGTCTTCTCTTCGAGATTGGATGGTGAAAGCATTCAGAGAGAGAAGAGCCCTTGCATTGTCCCTCAATGACACAAAAACTGCTGTAGATGAACTCCATAACATATTAAACATCCTTGTAGCTTTCATCATTTTGATAATCTGGCTTGTTATACTTGGAATTCCAATACTCCACTTTCTTGTGTTCATAAGTTCCCAGCTTCTGTTGGTGGTGTTTATGTTTGGGAATACCTGCAAGACGGTTTTTGAAGCTATCATCTTCTTATTTGTGATGCATCCATTTGATGTTGGTGACCGTTGTGAAGTAGATGGAGTCCAGATGCTAGTGGAAGAGATGAATATACTAACCACAGTTTTCTTGAGGTATGATAACCAAAAGATTATATACCCAAATAGTGTTCTAGCAACCAAGCCCATCAGTAACTATCAGCGTAGTCCAGATATGGGAGACGCAGTTGATTTCTGTATCCATGTCTCGACTCCAGTTGAGAAAGTTTCTATTATGAAAGAAAGAATAATAGATTATATCGAAACTAAGAATGAGCACTGGCATCCAGACCCAATGGTGATAATAAGGGAGGTGCAAGACTTGAACAAATTGAGCATATCAGTGTGGCTCACACACAGAATGAACTATCAGGACATCAAAGAGAGATGGAGCAGGAGAGCCCAATTGATTGAAGAGATGATCAAAGTATTCAGACAACTGGATGTTGAGTACCGTCTGCTCCCTCTTGATGTTAATGTTAGATATCTCCCCACTCTGACCTCCAATCGGTTTCCTTCCACTTGGACAACTTGTGCTACCTGA 2340 0.4214 MDFFMRSFWRSYSKINCVPLLNKQELKAEEREPLLILRQVNGNQMAQKEVVADFEGNYGRVTVTGSSSISKNKLGDSHENSSVQRKEDSQKEENYQQPTYSREEIPRFNRNGSFQGHSWRSHISRTKSRLVDPPNEPCARSDELNNGRQPETKKDNDVEVDDVEDIPEEYKRITFSPFSILQWISLASILAALVLNLWIPDIGRLKLWDLPLWQWEIMILALISGRLVSGWVVKVIVLFVERNFILRKRVLYFVYGLKSAVKNCIWLGLVLLVWHFILSNKAKKKMNDKILLYVTKSLICLFVGTLTWLLKTLLVKVLALSFHVKTFFQRIREALFEQYVIETLSGPPLVENETEASSAHGDLIIGSGPSTPIRSAALWKNTTIRKSSKFSRSLSSRNKKQERIPIDQLDKLNRRNISAWNMKRMISIIRQGAFNTLDEQILNSDIEDDSLLQIRSECQAKEAARKIFLNVAKPGSNYIFLQDVRQFMLEDEALKTMDLLGAVSAEQGSSKSSLRDWMVKAFRERRALALSLNDTKTAVDELHNILNILVAFIILIIWLVILGIPILHFLVFISSQLLLVVFMFGNTCKTVFEAIIFLFVMHPFDVGDRCEVDGVQMLVEEMNILTTVFLRYDNQKIIYPNSVLATKPISNYQRSPDMGDAVDFCIHVSTPVEKVSIMKERIIDYIETKNEHWHPDPMVIIREVQDLNKLSISVWLTHRMNYQDIKERWSRRAQLIEEMIKVFRQLDVEYRLLPLDVNVRYLPTLTSNRFPSTWTTCAT 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02452 779 PIRSF Memb_At2g17000 18 779 IPR016688 -
Bach3g02452 779 Pfam Mechanosensitive ion channel 544 748 IPR006685 GO:0016020|GO:0055085
Bach3g02452 779 SUPERFAMILY Sm-like ribonucleoproteins 593 652 IPR010920 -
Bach3g02452 779 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 68 774 IPR016688 -
Bach3g02452 779 MobiDBLite consensus disorder prediction 94 121 - -
Bach3g02452 779 MobiDBLite consensus disorder prediction 78 93 - -
Bach3g02452 779 FunFam Predicted mechanosensitive ion channel 603 652 - -
Bach3g02452 779 MobiDBLite consensus disorder prediction 65 158 - -
Bach3g02452 779 Gene3D - 603 652 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02452 Bach-Chr3 30652745 30655492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02452 20 774 Mechanosensitive Ion Channel Family AT1G53470 46.463 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02452 K22048 - cave:132190409 877.47