Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02371 ATGGCTCGAGGCAAGATCCAGATCAAGAGGATTGAGAACACGACCAACCGTCAAGTCACCTACTCTAAAAGACGAAACGGCCTCTTCAAGAAGGCGAATGAGCTCACCGTTCTCTGCGATGCCAAGGTTTCCATTGTCATGTTCTCCAGCACTGGCAAGCTTCATGAGTACATTAGTCCCTCTACTACGACAAAGGAGTTCTTCGATCAGTACCAGAAGACTGTAGGGACTGATCTCTGGAGTTCCCACTATGAGAATATGCAAGAGAGCTTGAAGAGGCTAAAAGAGGTGAACAGAAATCTGCACCGAGAGATTAGGCAGAGGATGGGAGATTGTTTGAACGATCTGAACATGGAGGATCTAAAGCTTCTAGAGGAAGAAATGGAACAGGCTGCAAAAGCTGTCCGTGAGCGTAAGTATAAGTTGATATCCAATCAGATTGACACCCAAAGGAAGAAGTATAATAATGAGAAAGAAGTGCACAACAGACTCCTACGTGACATGGATGCAAGAGCAGAAGATCCACGTTATGGATTGGTAGACAATGGAGGAGAGTACGATTCTGTGATTGGATTCTCCAACTTAGGCCCTCGCATGTTTGCCCTAACCCTGCAGCCCAGCCATCCTCCAAATCCTCATACTCATAGCGGAACAGGGTCAGATCTCACAACTTACCCTTTACTATTCTAG 690 0.4609 MARGKIQIKRIENTTNRQVTYSKRRNGLFKKANELTVLCDAKVSIVMFSSTGKLHEYISPSTTTKEFFDQYQKTVGTDLWSSHYENMQESLKRLKEVNRNLHREIRQRMGDCLNDLNMEDLKLLEEEMEQAAKAVRERKYKLISNQIDTQRKKYNNEKEVHNRLLRDMDARAEDPRYGLVDNGGEYDSVIGFSNLGPRMFALTLQPSHPPNPHTHSGTGSDLTTYPLLF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02371 229 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach3g02371 229 FunFam MADS-box transcription factor 16 13 97 - -
Bach3g02371 229 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach3g02371 229 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach3g02371 229 ProSiteProfiles K-box domain profile. 84 174 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach3g02371 229 Coils Coil 84 107 - -
Bach3g02371 229 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach3g02371 229 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach3g02371 229 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach3g02371 229 Coils Coil 151 171 - -
Bach3g02371 229 CDD MADS_MEF2_like 2 80 IPR033896 GO:0000977|GO:0045944
Bach3g02371 229 Coils Coil 114 141 - -
Bach3g02371 229 Gene3D - 13 88 IPR036879 GO:0003677|GO:0046983
Bach3g02371 229 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach3g02371 229 Pfam K-box region 81 167 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach3g02371 229 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 162 - -
Bach3g02371 229 SUPERFAMILY SRF-like 3 95 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02371 Bach-Chr3 30136451 30138402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02371 1 228 MADS-box Gene Family AT3G54340 57.576 1.42e-97 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach3g02371 K-box 2.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02371 K09264 - gmx:547720 386.726