Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02370 ATGGCTGGGTTCTTCTCTCTAGGCCCACAAAGCAAACGAGAAGATCAAGAAAAGGAAGAAAACAGTAATAGCTTATTCTTGTTCAGGAACGAAGAGATCTACAACAACAAGGGATTTGAGATATGGCCGCAGGCTTATCACCCACACCAAAACTTGAGCAACTACCACTCGTTTGGAGTGGGTCCTAGTCGAAGAAACTCCTCCAACGACGACGTTTCTGATGATCAGTCTACGAGATTTGGATTCACGGTGATGAGGTCTGGAGGTCTAGTAGGAGGTGGAGGAAGCATGAACTGTCAGGACTGTGGGAACCAAGCAAAGAAAGACTGTACACATCTTAGATGCAGGACTTGTTGCAGGAGCCGAGGGTTTCAGTGCCAAACACACGTCAAGAGTACTTGGGTTCCAGCAGCCAAACGCCGTGAACGACAACAACAACTCTCGTTGTTGCATCATCAGCAGCAACAACAACAGTTACAGACTCAACAACAGCACCAAGAGCACCTTCGTGGTGAGAATTCAAAACGGCACAGAGAAAACCAAGCTTCAGGCTCCTTAGCCTGCGTTCCATTACCCATCACCACCACAGGGTTGGAACTGGGACAATTCCCACCTGAAATGAACTCTCCAGCTGTGTTTCGTTGTGTGAGAGTAAGCCCAATGGACAGTACTCCGGATGAGCAATACGCGTATCAAACAGCTGTCAACATCGGAGGGCATGTTTTCAAGGGAATTCTATATGATCAAGGCCCTGAAGGTCCTTACACCACGGGTGGCCACGGTGAAAGCCCCCCCGGTGGCGGTGAAGCTCAACAACTTAACCTGATAACAGCCGCAGCAACCACCACCACCACCACTACCACAACCACCGGCAACGTACAATTTGACCCTGCACTGTACCCGGCTTCACTCAACGCATTCATGGCTGGTACGCAATTCTTCCCACCCCCAAGATCCTAA 960 0.4969 MAGFFSLGPQSKREDQEKEENSNSLFLFRNEEIYNNKGFEIWPQAYHPHQNLSNYHSFGVGPSRRNSSNDDVSDDQSTRFGFTVMRSGGLVGGGGSMNCQDCGNQAKKDCTHLRCRTCCRSRGFQCQTHVKSTWVPAAKRRERQQQLSLLHHQQQQQQLQTQQQHQEHLRGENSKRHRENQASGSLACVPLPITTTGLELGQFPPEMNSPAVFRCVRVSPMDSTPDEQYAYQTAVNIGGHVFKGILYDQGPEGPYTTGGHGESPPGGGEAQQLNLITAAATTTTTTTTTTGNVQFDPALYPASLNAFMAGTQFFPPPRS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02370 319 NCBIfam LRP1 C-terminal domain 202 251 IPR006511 -
Bach3g02370 319 MobiDBLite consensus disorder prediction 148 167 - -
Bach3g02370 319 MobiDBLite consensus disorder prediction 1 22 - -
Bach3g02370 319 MobiDBLite consensus disorder prediction 57 76 - -
Bach3g02370 319 NCBIfam putative zinc finger domain, LRP1 type 98 140 IPR006510 -
Bach3g02370 319 MobiDBLite consensus disorder prediction 144 182 - -
Bach3g02370 319 Pfam Domain of unknown function (DUF702) 96 252 - -
Bach3g02370 319 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 303 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02370 Bach-Chr3 30126619 30128055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02370 1 319 C2H2 Transcription Factor Family AT1G75520 46.612 6.79e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bach3g02370 DUF702 2.7e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02370 - - gmx:100807290 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02370 3 30126619 30128055 Bach12g00129 12 908875 910757 BWGD