Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02358 ATGTCCAACAACATTACGGGTCAAAGTCAAAACCATTTTGGGAACCAAGAATTTGATGCTTATGGATCTTGTATTAGAAGCAGTAATGCATTTCCTGAAGGATTTGGAGTATTTCCCAGCATTCAATCAATGGGAGACAGAATGTCAAGATCAATGGAGCTTTTGCAAGCCCCTGTACTAGCAGCAGAGGGCTCTGAAATCAGCCACACCAGACATCTGATGGATCTTCTTGGAGCAGCCAATAAAAACAATCACCAAACTCAGGGTCTCTCCCTTTCTTTAGGCTCTCATATGATTGTCTCCTCTGAGGAATACAGGCAACGATCTTTTAATCCAGGTCTCATGAGCCACAATTACTTCATATCTGGAGAAGAGGCAAGAGAATCTTATAATCCAGGAGTGGACCATTTAACCAGTGACTACTCTTTCACCAGCACTGCTTTTGCTCCATTTTCTACCTCTTTAAACCGTTCTGCTTCCACCTCTTATGGAATACAATCTTTTGCTGCTACCATTGGGAACTCAAGATACTTAAAACCAGTGCAATCCCTCCTTCAAGAACTTGTTGATGTTGGTGGAAATGTGGTCGACAGATTCAATGAAAAACTTGTGGGAAAGTTGTTTCATGGGAGTAGAACAGGATCTAGGAGACTCTCTGCCGAAATAAAAGCAGAGTTGTGCAATAATGGGCATTTATTGGCTGAGAAACAAGAACTTCAAGTCAAAGTTGCAAAGTTGATTGCCTTGTTGGATGAGGTGGAGGGTAGATACGAGAAATACTATCATCAAATGGAAATAGTGATGTCCTCCTTTGAAATGATAGCAGGTCTAGGAGCTGCTAAGTGTTATACTGGTTTAGCACTTCAAGCCATGTCTCGGCATTTCTGCAACTTGAGAGACGCCATAATGTCACAAATAAATATGGAGAAGAAAAGACTCTTGCAAGATTTACCTCAAATCAGTAGCGGATTATCACAACTAAGTTTATTTGATAGAGAAACTAGACAAAGTCGAATGTCCCTCCAACAGATTGGATGGATTCAGAGTCAGCGGCAAGTGTGGAGACCCATTAGAGGGTTGCCAGAAACTTCGGTAGCAATCCTTCGTTCATGGCTCTTTGAACACTTTCTCCACCCTTATCCTAATGATTCTGAAAAGCTAATGCTGGCATCCCAGACAGGTTTGACTAAAAACCAAGTCTCAAATTGGTTCATAAATGCTCGGGTACGGCTATGGAAACCAATGATAGAGGAGATGCACAAAGAAGAGTTTGGAGACACTTCAGAAGACTCCAACCCACCTGCTAATAACAACTACTTGGCGAGGGAAGATGCCACAGACACAGAACGAGTGGGGGATCGAAGTAGTACAAAGCAAAGTGAGCCTTGATTGAGATGCTGGCTGGTTTCTTACTTCAGGAGAGAGAGGGAGCAATTAAGATTCTAGTTTTCGAGAATCTTCCAATGATATTTCAACACATCTGGGCAATTTTATTTTATTTTTGTAAATTAAGTATTTTACCGAGAGATTAATCCTTTTAGGTAAGAAGATTACCGAAATAGTTCTTCCAACAAAATCTCTTCTTTACCTCTTCTACCCAACTATTATACCTATGTTTCATCTTGTTAATATTAATCAAAG 1641 0.4065 MSNNITGQSQNHFGNQEFDAYGSCIRSSNAFPEGFGVFPSIQSMGDRMSRSMELLQAPVLAAEGSEISHTRHLMDLLGAANKNNHQTQGLSLSLGSHMIVSSEEYRQRSFNPGLMSHNYFISGEEARESYNPGVDHLTSDYSFTSTAFAPFSTSLNRSASTSYGIQSFAATIGNSRYLKPVQSLLQELVDVGGNVVDRFNEKLVGKLFHGSRTGSRRLSAEIKAELCNNGHLLAEKQELQVKVAKLIALLDEVEGRYEKYYHQMEIVMSSFEMIAGLGAAKCYTGLALQAMSRHFCNLRDAIMSQINMEKKRLLQDLPQISSGLSQLSLFDRETRQSRMSLQQIGWIQSQRQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKPMIEEMHKEEFGDTSEDSNPPANNNYLAREDATDTERVGDRSSTKQSEP 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02358 462 ProSiteProfiles 'Homeobox' domain profile. 373 414 IPR001356 GO:0003677
Bach3g02358 462 Pfam Associated with HOX 172 303 IPR006563 -
Bach3g02358 462 CDD homeodomain 354 415 IPR001356 GO:0003677
Bach3g02358 462 MobiDBLite consensus disorder prediction 422 462 - -
Bach3g02358 462 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 93 435 - -
Bach3g02358 462 Pfam Homeobox KN domain 371 410 IPR008422 GO:0003677|GO:0006355
Bach3g02358 462 SMART HOX_1 354 418 IPR001356 GO:0003677
Bach3g02358 462 MobiDBLite consensus disorder prediction 443 462 - -
Bach3g02358 462 SUPERFAMILY Homeodomain-like 360 421 IPR009057 -
Bach3g02358 462 Coils Coil 236 256 - -
Bach3g02358 462 Gene3D - 335 429 - -
Bach3g02358 462 SMART prehox3 166 304 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02358 Bach-Chr3 30028398 30030303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02358 85 429 Homeobox Transcription Factor Family AT1G19700 43.443 3.11e-84 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bach3g02358 POX 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02358 - - qsa:O6P43_016216 626.706