LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach3g02356	ATGTCCTCCATCAAAGTCAGTATCCTCCTAATAGCTTTTCTTGCAGCCACACCCTCCCAAGCTCACCCTGGTTTTGGTTTTGGTTGGGGTGGTCACGCTGGAAATGGGGCAACTCCTTTTGCTGCTCTTTCTCCTGATTACTATCAGTCTTCGTGTCCCCAAGCTAATGACATTGTCATGTCAGTGTTAGAGAAGACCATTGCCAAGGATCCCAGAATGGCTGCCTCTCTGCTTAGGCTTCACTTTCACGACTGCTTCGTTCAGGGCTGTGACGCATCAATTTTACTAGATGATAGTGCTACTATCAGAAGTGAGAAGAATTCTGTACCAAACAAAAATTCTGTACGAGGTTTTGAAGTGATTGATGAGATCAAATCTAAGTTAGAAGAAGCATGCCCTGAGACTGTCTCCTGTGCAGACATTCTTGCTCTTGCTGCCAGGGGCTCCACTGTTTTTAGGGGAGGACCAAGCTGGGAGCTCCCATTAGGCAGGAGAGACTCAACAAGAGCAAGCCTGAGTAGCTCAAACAGCAACATTCCACCACCAAACTCTACCATTGGAAACCTTGTCACATTTTTCAAGCGCCAAGGCCTTGATGAAGTTGACCTTGTTGCCCTATCAGGTGCGCATACCATTGGAGTTGCAAGGTGTGTGACATTCAAGCAGAGACTGTATAACCAAAAAGGAGACAACCAACCAGATGAGACCTTAGAAAAATCCTTCTACTTTGGTCTCAAAACTGTTTGCCCACAATCTGGTGGTGATAACAACATCTCTCCCTTAGACTTTGGCTCCCCTACAACTTTTGACAATTCCTATTTCAACCTCATTCTTTGGGGAAAAGGGTTACTGAATTCAGATCAAGTGCTTCTCAGTGGGACTGTCGAAGAGACCCAGCAATTGGTCAAGCAATATGCGCAAGATGACATTCTCTTCTTTAACCAATTTGCTAAGTCCATGATCAAGATGGGTAATATCAACCCTCTCACTGGTCTTAATGGTCAAGTTAGGAAGAACTGTCGCAAAGTTAATTAA	1035	0.4483	MSSIKVSILLIAFLAATPSQAHPGFGFGWGGHAGNGATPFAALSPDYYQSSCPQANDIVMSVLEKTIAKDPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNSVPNKNSVRGFEVIDEIKSKLEEACPETVSCADILALAARGSTVFRGGPSWELPLGRRDSTRASLSSSNSNIPPPNSTIGNLVTFFKRQGLDEVDLVALSGAHTIGVARCVTFKQRLYNQKGDNQPDETLEKSFYFGLKTVCPQSGGDNNISPLDFGSPTTFDNSYFNLILWGKGLLNSDQVLLSGTVEETQQLVKQYAQDDILFFNQFAKSMIKMGNINPLTGLNGQVRKNCRKVN	344

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach3g02356	344	ProSitePatterns	Peroxidases active site signature.	74	85	IPR019794	GO:0004601
	Bach3g02356	344	Pfam	Peroxidase	61	308	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Bach3g02356	344	CDD	secretory_peroxidase	43	343	IPR033905	GO:0004601\|GO:0042744
	Bach3g02356	344	FunFam	Peroxidase	180	323	-	-
	Bach3g02356	344	Gene3D	Peroxidase, domain 2	180	324	-	-
	Bach3g02356	344	PANTHER	PEROXIDASE 72-RELATED	42	343	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Bach3g02356	344	ProSitePatterns	Peroxidases proximal heme-ligand signature.	202	212	IPR019793	-
	Bach3g02356	344	PRINTS	Haem peroxidase superfamily signature	262	277	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Bach3g02356	344	PRINTS	Haem peroxidase superfamily signature	202	217	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Bach3g02356	344	PRINTS	Haem peroxidase superfamily signature	154	166	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

Showing 1 to 10 of 25 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach3g02356	Bach-Chr3	30018874	30020188	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach3g02356	1	344	Peroxidase	AT1G44970	69.767	3.04e-179	498

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach3g02356	K00430		-	qsa:O6P43_018620	519.62

Showing 1 to 1 of 1 entries