Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02346 ATGGAGTCTACCAATCTCCATGACCTACACCATCCGCTTCAAGACCAACCTCCTCCTGTTGACACTGCTACTTCTTTATCAGCCTATGGAGTTGGAAGCAGCCATTCTTGGACACCAAATATCACTTTGAATGCTGTTAACTTGAACCAAAATCTCCAAGAATCTGGACCCAGATCAAGAGCTTCAACGCAAGACAACGATATTCAGGCACCTTCTACCATGATCCAACATTTAGGTTATCAGTGGGGAAGTGATGGAGAAAGCTGCTTAAGTAGCAGTCAGCGCAACCATGATATAGACCTACAGTTTTCAAAGATAAAGGAAGAGATCTCAGATACTTTCCCAAAATTCACTGAAATGCTAAACAGTGGTCCCTCATGTATGGAACATTACCGGGCTGCACCTACCACGAGCCATATGTTAAAGAATGAGAACAAAGATTTGAATGCTCTTAGTGAGAAGCTCTTGCTCAAGACTCTATCTTCCGGAGAAGACTTCTATTCTAGTTTTGGTATGGGAGTGGGGGTACCAAGTAGAGGGAGTTTTAGCCAGATTTACCCGAGTATAAATATCTCAAACTTAAACCAATCATCCTCACCAGCAATTTCAAGCTCCTTAGATATCAACATGCAGTCCTTGGATCTATTAAGCTCTCCAAATGGCGTATTAATGAGCCAGCGTTCACAAGATGGTCTTGGTCTTGGTACATTTACAGATAACCTTTCCTCTCGTATAGATCAGATGCAGCAGCGGCAGCCCACTGAAAGGTCGTCTTGTAACTCTAGCAATCCATCTCACCTCATCAATGGCACGGCAGAAACCAAGAGAACCAGCCTTCTAATGGATTCAAAGGCCTCACAATCCCAAGCAGTATCAAAAAAATCGCGATTGGAATCTCGTGCATCATGCCCACCCTTTAAGGTTAGAAAAGAGAAACTAGGAGATAGGATTGCGGCGCTTCAGCAGTTGGTGGCTCCTTTTGGCAAGACAGACACAGCATCCGTACTTATGGAGGCTATAGGATACATCAAATTCCTTCAAAACCAGGTCGAGACACTGAGCGTTCCATATATGAGGTCATCCCGCAACCAGACCACCAGATCGGTGATGCGAGGGGGCTCAGGCATGGAGGACGCAAAGGAGGAACCGAAGCAAGATCTTAGGAGCCGAGGGCTCTGTCTAGTGCCATTGTCATGCATGTCTTATATAACAGGTGATGGTGGCAGTGGAGTGTGGCAACAACCAGACTTTGGTGGAGCTACTTAATCAGCAATAATACCTTTATCTCGATCAAACATAATAAATATTCCAAAAAAAGAAAAAGAAAAAAGAAGAAGAAGATCTCGAGCATGATCTTTTTGAGAAAAATGGGCGGAAAGAAAAAAAAGAAAGAAAGAAATTCTATATCTTGGGCTGGTATATATAAATGCTAAGCCCATGTTTGTTGTTGTTAGGAGCATAAATGCCGATTTTATCTTTGTTTAATGGAGCAAACTTGGTCTTCCTGTGGAACAAGTCGAGGATGGACCAAGTTTGATCCATTCAAACCATCCATTTACATATGTACTTTTGGAGCTCACCGTTGGTGTACGCTAATCTAATCTAAT 1607 0.4294 MESTNLHDLHHPLQDQPPPVDTATSLSAYGVGSSHSWTPNITLNAVNLNQNLQESGPRSRASTQDNDIQAPSTMIQHLGYQWGSDGESCLSSSQRNHDIDLQFSKIKEEISDTFPKFTEMLNSGPSCMEHYRAAPTTSHMLKNENKDLNALSEKLLLKTLSSGEDFYSSFGMGVGVPSRGSFSQIYPSINISNLNQSSSPAISSSLDINMQSLDLLSSPNGVLMSQRSQDGLGLGTFTDNLSSRIDQMQQRQPTERSSCNSSNPSHLINGTAETKRTSLLMDSKASQSQAVSKKSRLESRASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMRSSRNQTTRSVMRGGSGMEDAKEEPKQDLRSRGLCLVPLSCMSYITGDGGSGVWQQPDFGGAT 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02346 421 FunFam Transcription factor bHLH123 family 307 369 - -
Bach3g02346 421 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 297 346 IPR011598 GO:0046983
Bach3g02346 421 MobiDBLite consensus disorder prediction 248 269 - -
Bach3g02346 421 CDD bHLH_AtbHLH_like 304 354 IPR045239 -
Bach3g02346 421 MobiDBLite consensus disorder prediction 363 384 - -
Bach3g02346 421 MobiDBLite consensus disorder prediction 1 27 - -
Bach3g02346 421 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 307 361 IPR036638 GO:0046983
Bach3g02346 421 Gene3D - 307 369 IPR036638 GO:0046983
Bach3g02346 421 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 169 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02346 Bach-Chr3 29959662 29963019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02346 20 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 42.082 1.11e-78 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02346 - - pcin:129318806 441.81