Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02299 ATGGAACGCTCCGCATCGATCCCTTCATTTCCACCTTTCCTTTCACTTCAAGGATCGATCGGTTCGCGGGATCGGTCGATCACTCTTTGTACCAGCAGGCATCTGAAGATTGGGGTTCTGCTGATGGCAAGTGGGTTTGGGGAATCAACAAGCAGGTCACCCCCAAGCCCTTGCTGCTCAAACGATAATAATAACAATGACGCTGGCAATTTTGAATGCAACATTTGCTTCGACTTAGCACAAGACCCAATAATTACTTTGTGTGGTCATCTTTTTTGCTGGCCTTGTCTTTATAAATGGCTTCAGTTCCATTCACAATCACGAGAATGCCCGGTATGCAAAGCCCTTGTTGAGGAGGAGAAGTTGGTTCCCCTATATGGGAGAGGAAAGACATCAACTGACCCAAGATCCAAGTCTATTCCCGGCGTCAATATCCCACATCGTCCAGCTGGTCAGAGACCTGAAACTGCTCCGCCCCCTGAATCAAATCATTTTCCTCAAAACGGGTTTGGATTTATGGGTGGGTTGGGAGGATTTGCCCCAATGGCTACGGCAAGATTTGGGAATTTCACATTATCTGCAGCATTTGGTGGTTCGATTCCGTCTTTATTTAACTTTCAATTGCATCGGTTTCATGATGCAACCATGTATGGTGGAACAACGGGTTATCCTTATGGATTTTCGAATTCATTACATGGTGGCTATGTCCATGGATATCCTCGGCACACTGGTCAAGGGCAACAAGATTATTATCTGAAGCGGCTGCTTCTGTTTGTTGTTTGCTGTGTCTTTCTTGCTTTTATTTGGCAATAG 813 0.4563 MERSASIPSFPPFLSLQGSIGSRDRSITLCTSRHLKIGVLLMASGFGESTSRSPPSPCCSNDNNNNDAGNFECNICFDLAQDPIITLCGHLFCWPCLYKWLQFHSQSRECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPHRPAGQRPETAPPPESNHFPQNGFGFMGGLGGFAPMATARFGNFTLSAAFGGSIPSLFNFQLHRFHDATMYGGTTGYPYGFSNSLHGGYVHGYPRHTGQGQQDYYLKRLLLFVVCCVFLAFIWQ 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02299 270 Pfam Zinc finger, C3HC4 type (RING finger) 73 113 IPR018957 GO:0046872
Bach3g02299 270 CDD RING-HC_AtRMA-like 71 115 - -
Bach3g02299 270 ProSitePatterns Zinc finger RING-type signature. 88 97 IPR017907 -
Bach3g02299 270 SMART ring_2 73 113 IPR001841 -
Bach3g02299 270 FunFam E3 ubiquitin-protein ligase RNF185 isoform X2 56 127 - -
Bach3g02299 270 ProSiteProfiles Zinc finger RING-type profile. 73 114 IPR001841 -
Bach3g02299 270 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 55 266 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bach3g02299 270 MobiDBLite consensus disorder prediction 127 163 - -
Bach3g02299 270 SUPERFAMILY RING/U-box 70 126 - -
Bach3g02299 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 127 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02299 Bach-Chr3 29670302 29671821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02299 71 253 C3H Transcription Factor Family AT1G19310 67.196 1.25e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02299 K10666 - qsa:O6P43_018852 380.563