Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02278 ATGGCTATCCGGGTTACTTTCAGTTACTCTGGTTATTTGGCCCAAAGCCTGGTATCCGGTTCTCGTATGGGTAATTCGCGTTGTTTTCAGGAATGCTGGATCAGGTCTGGCAAATTCAGCACTAACCAGAAACCTGATTTCGACCCCTCTGGTGGCGTGCGCAATTACCAAACTGATTTTAGACGACCGAAATCGAATTGCTGGGTTAAGCATTCAGCTTCAACTTATGCTACAATCGCTGGGGAAATTCTCGGTGAGAATTGTAAAAATCCGATCATTCTGTCTTTGGTTTCGATGATGACATCAACGGTCTCTGTATCGGGTTCATCCACTTCGACTATGGGTATCCTTGGTATTTCCCCGTTAAAGGCCACCTCGATCATACCCTTTCTACAGGGATCGAAGTGGTTTCCCTGTAACGAGTCATTCCCTATTCCTGCAGGCCATAAAGTGGATAAATCTGGAACACAGTGTTTTGATGATAAGGATGCTAAATTTAGTCACAAGGGTTTTGAGACGACGAGTTGGCTTTCACGCTTGTTGAATGTCTGCTCAGAAGATGCAAAGGCCGCGTTTACTGCTGTTACTGTTAATTTGCTATTTCGGTCGTGCTTGGCTGAACCGAGATCGATTCCCTCGTCTTCTATGTACCCAACTCTGGATGTCGGTGACCGTATTCTAACAGAGAAGGTTTCCTTCTTCCTCAGAAAGCCTGATGTTTCAGATATAGTTATATTTAAGGCACCTCCCATTTTACAGGAAATTGGCTATAGTTCTTCTGATGTATTTATCAAACGAATTGTGGCGAAGGCTGGGGACTGCGTCGAAGTCCATGACGGAAAACTACTGGTTAACGGTGTTGTTCAGGAAGAAGAGTTCGTTTTAGAACCACTTGATTATGATATGGATCCAGTAGTAGTACCAGAAGGTTATGTCTTTGTGATGGGAGACAATCGGAATAAAAGCTTTGATTCACACAACTGGGGTCCACTCCCTGTTAAAAACATTGTTGGTAGATCAATGCTTCGGTACTGGCCTCCATCTAAAGTATCTGACATTGGTTACATACCCCCTTCTGGAAAGAAGTCTTTAGCACTTTCTTGA 1104 0.4384 MAIRVTFSYSGYLAQSLVSGSRMGNSRCFQECWIRSGKFSTNQKPDFDPSGGVRNYQTDFRRPKSNCWVKHSASTYATIAGEILGENCKNPIILSLVSMMTSTVSVSGSSTSTMGILGISPLKATSIIPFLQGSKWFPCNESFPIPAGHKVDKSGTQCFDDKDAKFSHKGFETTSWLSRLLNVCSEDAKAAFTAVTVNLLFRSCLAEPRSIPSSSMYPTLDVGDRILTEKVSFFLRKPDVSDIVIFKAPPILQEIGYSSSDVFIKRIVAKAGDCVEVHDGKLLVNGVVQEEEFVLEPLDYDMDPVVVPEGYVFVMGDNRNKSFDSHNWGPLPVKNIVGRSMLRYWPPSKVSDIGYIPPSGKKSLALS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02278 367 FunFam Peptidase/ serine-type peptidase 213 344 - -
Bach3g02278 367 SUPERFAMILY LexA/Signal peptidase 202 352 IPR036286 -
Bach3g02278 367 ProSitePatterns Signal peptidases I signature 3. 312 325 IPR019758 GO:0004252|GO:0016020
Bach3g02278 367 Gene3D Umud Fragment, subunit A 201 353 - -
Bach3g02278 367 PRINTS Bacterial leader peptidase 1 (S26A) family signature 307 326 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bach3g02278 367 PRINTS Bacterial leader peptidase 1 (S26A) family signature 204 220 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bach3g02278 367 PRINTS Bacterial leader peptidase 1 (S26A) family signature 263 275 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bach3g02278 367 ProSitePatterns Signal peptidases I serine active site. 213 220 IPR019756 GO:0004252|GO:0016020
Bach3g02278 367 PANTHER SIGNAL PEPTIDASE I 143 351 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bach3g02278 367 CDD S26_SPase_I 207 339 IPR019533 GO:0004252|GO:0006465
Bach3g02278 367 NCBIfam signal peptidase I 191 346 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bach3g02278 367 Pfam Signal peptidase, peptidase S26 188 345 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02278 Bach-Chr3 29546524 29549126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02278 216 357 MADS-box Gene Family AT1G29960 31.944 1.49e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02278 K03100 - qsa:O6P43_018882 498.819