Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02272 ATGCCTCTCCCTCGCAAGTCTTTTTCTTCTTCTTCTCCTTTACCCTCTACGCCTTCCGTTGTTTCTGGTACCCAACAAACGGAAGGTGACAGTAATGCAGATAATTTCGTTCACAGCAATGGGCATTCCATTCGGCAGCGCCGGCTGACCAGACAGAGGAAGCTCCGGTACCTCAGCCCCCAAGATGTCGGCTTGCCCGTCACTGAGCCTTCTTCTTTACCGGATACGCCTCAGTCATCTCGTAAGTCCCTGTCACTTGGTGGTTCTGACCACTGGTCGTCGTCTGCGGTGCCGCAACCGCTGCCGCTCCCGGAATCACCGTTGACTCGAAGACCGGAGTCAACGACTCCAAATTCCGGCCAGTCCCAGCCAGTATCTCCTCTGGTAGAACATCTCGGCCTTGCTTTCGGGAGGAAGTCAGTGGATCATGCAGTTACAAACACGAAATCATCAAGCAATTATGGAAGATCCTCTAGCGGTCCAGCCAATGAAAAAGCAAAGTATAATTTGAGAGTGAATATTCCTTCTCCAAGTTTCTCGATTGGTTGTACACCTCAAAGATTAAATTTTGGAGATCTTTTTCCCTCTTCGGTTCCTTCTAATGCAGAAAATTCAAATAGAGACCCTAGAGGACTCTCTTCTGATATAGGATCTGAGAGTATTTGCAACTTGACGTTGCCTGTTTCTGCCAAGAGTGCTCCAACAAGTGTTTTCTCCAGTCCTGTTAGTAGTCCACGTAGGTCAAGCAATATAGATTTCTTCGATCCTTCAATCATTGTTCCTCAAGATCATAATCCTCTTCGTAGTCCAGGGAGCCACAGTCCTTACATCAATCATATAATTAGAGAATCACCTCAGCACCAAAAATTCTTTTCCAGGGTGCCTGAAAATAACCATGCAGATGCACATCCTTTGCCTCTTCCTCCGGGAGCTACTTTACCTGTACCATCATTCTTGCAGCAACAATATCAACCAAGTGCTACGTATCATAGTGGAGAAAATTCTCTCTCGATGAAAGGCAAATGGCAGAAAGGACAACTTATTGGACGTGGTACATTTGGAAGTGTTTATCACGCAACCAACCTAGAGACTGGAGCATCATGTGCAATGAAGGAGGTGGACATTATTCCTGATGATCCAAAATCTGCTGAGTGTATAAAGCAACTGGAGCAGGAAATCAAAATTCTCCGTCAACTAAACCATCCAAATATTGTCCAATATTATGGCAGTGAAATAGTTGGTGATCACTTATACATATATATGGAGTATGTTCATCCTGGTTCAATCAACAAATTTGTGCGTGACCATTTCGGGGCTATGACAGAGTCTGTAGTTCGCAATTTTACCCGCCATATTCTATCTGGCTTGGCCTACTTGCACAGCACCTGTACTATCCACAGGGATATCAAAGGTGCGAACTTGCTGGTTGATTCATCAGGCACTGTCAAGCTTGCAGATTTTGGGATGGCAAAAATTCTGACAGGGCAATCATATGATCTTTCATTGAAGGGCAGTCCATATTGGATGGCTCCAGAGGTTATGAAGGCTGCCATAAAGAAAGATACCAATCCTGCCCTTGCCTTGGCTGTTGATATATGGAGCTTAGGATGCACCATCATTGAAATGCTGACCGGCAGACCTCCTTGGAGCGAGTTTGAAGGGCCTCAAGCCATGTTCAAGGTTCTGCATAAAACCCCACCTATACCTGAAACATTATCACCGGAGGGAAAGGATTTTCTCCAGCAATGTTTTCTTCGAAATCCTGCAGAGCGACCATCTGCAGCGAAGTTGCTTGACCATGCTTTTGTACGAAACTTGCACGATCTTGATCAGGGTGTTCTAGTTCGGCCACAACGGCATCTGAGAATAGACTCAGGAGATAATTCTCGAAGTCCTCCCAAAGACTCTGCTAAACAAAACCATGATGTAACACAATCCTCCATGGGCACAGGGATTATGAGCAAAATCCAGAGATTAATGGGCGATACTTCCAACCAATATATTGCTAACTCTATTGTTGCATCTTCTCATTACTCTGGACCAGAATTTAATATTCGTCAATCTACCTTGAAACCTAGGACACTCAATTACATGTCTGTTCCAAACTCCAACAAGATACCCCTCACTGTTATGAGAATCATCACGCACCTTTGAAACATCGCTAGTTCGAAGACAGGCCGGTGGGAATCTGACTTGCTTATTCTAATTGTCTTCTTCAAGTCTCGATGGGCGATAGCTTGGAGAATAAACTAGGCAGAAATTTCGAAGCGAGCGTTCCTTCC 2282 0.45 MPLPRKSFSSSSPLPSTPSVVSGTQQTEGDSNADNFVHSNGHSIRQRRLTRQRKLRYLSPQDVGLPVTEPSSLPDTPQSSRKSLSLGGSDHWSSSAVPQPLPLPESPLTRRPESTTPNSGQSQPVSPLVEHLGLAFGRKSVDHAVTNTKSSSNYGRSSSGPANEKAKYNLRVNIPSPSFSIGCTPQRLNFGDLFPSSVPSNAENSNRDPRGLSSDIGSESICNLTLPVSAKSAPTSVFSSPVSSPRRSSNIDFFDPSIIVPQDHNPLRSPGSHSPYINHIIRESPQHQKFFSRVPENNHADAHPLPLPPGATLPVPSFLQQQYQPSATYHSGENSLSMKGKWQKGQLIGRGTFGSVYHATNLETGASCAMKEVDIIPDDPKSAECIKQLEQEIKILRQLNHPNIVQYYGSEIVGDHLYIYMEYVHPGSINKFVRDHFGAMTESVVRNFTRHILSGLAYLHSTCTIHRDIKGANLLVDSSGTVKLADFGMAKILTGQSYDLSLKGSPYWMAPEVMKAAIKKDTNPALALAVDIWSLGCTIIEMLTGRPPWSEFEGPQAMFKVLHKTPPIPETLSPEGKDFLQQCFLRNPAERPSAAKLLDHAFVRNLHDLDQGVLVRPQRHLRIDSGDNSRSPPKDSAKQNHDVTQSSMGTGIMSKIQRLMGDTSNQYIANSIVASSHYSGPEFNIRQSTLKPRTLNYMSVPNSNKIPLTVMRIITHL 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02272 717 SMART serkin_6 342 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g02272 717 FunFam Mitogen-activated protein kinase kinase kinase 5 339 642 - -
Bach3g02272 717 Pfam Protein kinase domain 343 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g02272 717 ProSiteProfiles Protein kinase domain profile. 342 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach3g02272 717 MobiDBLite consensus disorder prediction 1 43 - -
Bach3g02272 717 SUPERFAMILY Protein kinase-like (PK-like) 340 678 IPR011009 -
Bach3g02272 717 MobiDBLite consensus disorder prediction 1 126 - -
Bach3g02272 717 MobiDBLite consensus disorder prediction 71 96 - -
Bach3g02272 717 MobiDBLite consensus disorder prediction 617 649 - -
Bach3g02272 717 Gene3D Transferase(Phosphotransferase) domain 1 339 642 - -
Bach3g02272 717 MobiDBLite consensus disorder prediction 617 637 - -
Bach3g02272 717 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Bach3g02272 717 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 71 610 - -
Bach3g02272 717 MobiDBLite consensus disorder prediction 109 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02272 Bach-Chr3 29512486 29516769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02272 284 605 MAP Kinase Kinase Kinase AT5G66850 67.901 2.83e-156 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bach3g02272 Pkinase 9.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02272 - - pcin:129303344 822.772