Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02269 ATGGAAGTAATATTGAATAGGTACTCCTCCTCCACTTCATCCAGCTCTGACACATCTTCTTCAGAGTCTAATTCCTTGTCAAGCAAGACGCCAAGAAATTGTAAGAAAGAAGAGAGAACCAAAGGTCCATGGAGCGCTGAAGAAGACCGGATTTTGACCCGACTGGTTGAGAGATACGGACCCCGGAATTGGTCATTGATAAGCCGTTACATAAAGGGTAGGTCTGGCAAATCTTGTAGGCTTAGATGGTTTAACCAGCTGAGCCCGAGCGTGGAGCACCGCCCATTCACGCCGGAAGAGGACGAGACTATTCTAACAGCACATGCCCAGTATGGTAACAGGTGGGCCACCATTGCACGCCTCTTACCCGGTCGAACAGACAATGCCATCAAGAACCACTGGAACTCCACGCTCAAGCGAAGGGTAAAACAAGGAGGACCAACAAGAGGAGAAGCTCTAGGTGTTCGTGTCAGTGTTTCTCACCAAACGGAAAGGGAAAATTCTCCTGGATCTTGGCAGCCCTGCATGGGAATGGGCAAGGGATTGGGATTGGAAGATGATCCGTTGACCGCGTTGACTCTGGCACCCCCTGGGCTTGCGATGACCGATCACACACCCACCCAGAATATGGCGACGTCCGAGTTTTGGGATGTGATGAGAAATGTGATTGCCAAGGAAGTTAGAGAATATGTGTCTTCTGCTGCATTGTTTTCTGATAATTCGGCTTTTCGTTGA 735 0.4939 MEVILNRYSSSTSSSSDTSSSESNSLSSKTPRNCKKEERTKGPWSAEEDRILTRLVERYGPRNWSLISRYIKGRSGKSCRLRWFNQLSPSVEHRPFTPEEDETILTAHAQYGNRWATIARLLPGRTDNAIKNHWNSTLKRRVKQGGPTRGEALGVRVSVSHQTERENSPGSWQPCMGMGKGLGLEDDPLTALTLAPPGLAMTDHTPTQNMATSEFWDVMRNVIAKEVREYVSSAALFSDNSAFR 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02269 244 Gene3D - 40 92 - -
Bach3g02269 244 CDD SANT 43 85 IPR001005 -
Bach3g02269 244 Gene3D - 94 156 - -
Bach3g02269 244 SUPERFAMILY Homeodomain-like 39 134 IPR009057 -
Bach3g02269 244 FunFam Transcription factor MYB44 95 141 - -
Bach3g02269 244 CDD SANT 95 138 IPR001005 -
Bach3g02269 244 FunFam MYB transcription factor 41 92 - -
Bach3g02269 244 SMART sant 40 89 IPR001005 -
Bach3g02269 244 SMART sant 92 140 IPR001005 -
Bach3g02269 244 ProSiteProfiles Myb-like domain profile. 36 87 IPR001005 -
Bach3g02269 244 MobiDBLite consensus disorder prediction 1 43 - -
Bach3g02269 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 142 IPR017930 -
Bach3g02269 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 91 IPR017930 -
Bach3g02269 244 PANTHER MYB PROTEIN-RELATED 41 168 - -
Bach3g02269 244 Pfam Myb-like DNA-binding domain 44 102 - -
Bach3g02269 244 ProSiteProfiles Myb-like domain profile. 88 138 IPR001005 -
Bach3g02269 244 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02269 Bach-Chr3 29498352 29499086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02269 38 145 MYB Transcription Factor Family AT3G50060 76.852 2.59e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach3g02269 Myb_DNA-bind_6 8.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02269 - - cill:122295634 265.774