Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02231 ATGCAAGGGCAGAGGGGTGCACTTGGTTCTTTTCCTGAAACCATACAATTCGATTATGGATCTACATCAAGTAATGCCACAGTGGATCAGCAGATTTGCTGGAATAATATGAGGAATCCTGCAGAAAACCGAATACCTGAATATATACTTGCACCTGGTGATATGAACACATCATATTTGAATTCTATATACCATGAATGGCCGAACTTGAGTGGATGGAGCTTAGGTGAGCCAAGTTCTAGTAATACACAGAATGAGATTAACCATAATGAGCAGAAAAGAGAACTTGGATGGTCTTCTTCCGTGAGTACTGGTGCTGTTCCTGGTCCAAGATTGGAAGAAAGGCACTTTGAATCAACTAATATTCTTCCATCGGACAGTGCCAATGCAAGGCCAATCTACAGGCGGGGTTCCCATTCACATCCCGTGTCACAGGACTTTAACTTAAATGCAGGTGTGGTGGACAATGATAGTGATTCTATTCAACATGCAGAGCATTCTAGCATACACAAGTCTAGTGGATCTGTAAATGAGCGTCCCCCACCTCCTGTTGGTTCTGGTCCTTCTCTGCTTCCTTCTGGAAGTAACGGCTTCTTGGTAGAAGATAATGATGGTAGGCCAGGTTGTTCTGTGGACACTCGCCGTGTATCTTGCAAAAGAAAGGCTGTTGAAGGGAGTATTGGACAATCTTCAGACGGCGGAAGTTCTAGCTACAGTCATCAGACAGATAGTAGTTTCTGGTCCACCCTTCCTACTCAGTGTTATGTAGGTAGCAGTTTAAGCAGATCTGCTTCATCAGAACAGGTAAATGCAAGACTTGGCCTGGGTGTGGGGGATGACTCCACTGAAAACCTTCCTGATTCAACTGTTGCGGGGAGCTCAGAAAGCTTCCACCGAAATTTCCGTTTGAGGATAAACCCTTCAAACCAAGATTCAATTCCTCCCACTACATTCTCAACTGGGAGTGTGATAAGGCATTCTAATGTTTCGTCCTTTCCAATGTCTCAAAGGTTTCCTGTTGATAATTCTCTGGACTTGAGGTCAGCACCAGCAGTGGATAACTTGATTCCCCAAAGCCAACCCCCTGTAGTTCATGTTCCTGCATTACCAAGGAATATGCAATCATTTAGGTGGAGTGGTGGCTCCAGCTCAAGAAACAGCCATTCATCAATCCCAATTATTTGTGCAGACAGGGACAGTGTACAACATGAAGAAGTAGGCTCAAGAAATACGCCTAGAAACATGTTAGAGCAACCATTGTTTGTACCTGCAACTGATTTAAGAAGTTTGGAACGAAATTCAACAATTAGAGCTTCTAGTAGTGCAAATTTAAGTATTTCAGGAAATGTTGCTTCTTCATCACGGACGGGATCTAGTTCTGTTGTAAATCCTTCATCTGCCTCAACCTGGGTTTCTTGTCCTAATCCTCCTCAAAACCCGCGGAGGTTATCTGAATACGTTCGTCGGTCGTTGTTTTCTCCTGGAACCGAGGCTGCTGCAGGTCAGAGCAATAATTATTCTTCTTTGCGCTCTGGTCCTACAGCTTCATCTGAAGCTAGGATTTTCGCAGCTGATGCTAGTAGCCAGGGACACAATCAGTCACATCCGAGATCATCTTCGTGGATGGAGAGGCAAGGTGATGCTGAATTTGGAATACCCTATTCATTGCGTTCTTTGGCTGTTACTGGTGAAGGAAGCAGCAGAATTGTGTCTGAGCTTCGCAATGTTTTGGGCCTCATGCGTAGGGGTGGGAGCCTGCGATTTGAGGATGTCATGATCCTTGACCAGTCAGTATTTTCTGGAATGGCTGATATTCACGATAGACACAGGGATATGAGACTTGATGTTGATAACATGTCTTACGAGGAGTTACTGGCTCTTGAAGAGCGCATTGGAAATGTGAGTACCGGCTTGAGCGAGGAAACGATATTGAAACTTTTGAAACAGAAGAAGTATTCAGTTGAAACTGGAGCCCAGCTTGCGGCAGAACCCTGCTGTATTTGCCAGGAAGAGTATAATGATGGAGACGATATGGGAACGCTTGATTGCGGGCATGATTACCATGCCGACTGTGTTAAACAGTGGTTAAAGCAAAAGAATCTGTGTCCCATTTGCAAGACAACGGGCTTGGCAACATGA 2139 0.4469 MQGQRGALGSFPETIQFDYGSTSSNATVDQQICWNNMRNPAENRIPEYILAPGDMNTSYLNSIYHEWPNLSGWSLGEPSSSNTQNEINHNEQKRELGWSSSVSTGAVPGPRLEERHFESTNILPSDSANARPIYRRGSHSHPVSQDFNLNAGVVDNDSDSIQHAEHSSIHKSSGSVNERPPPPVGSGPSLLPSGSNGFLVEDNDGRPGCSVDTRRVSCKRKAVEGSIGQSSDGGSSSYSHQTDSSFWSTLPTQCYVGSSLSRSASSEQVNARLGLGVGDDSTENLPDSTVAGSSESFHRNFRLRINPSNQDSIPPTTFSTGSVIRHSNVSSFPMSQRFPVDNSLDLRSAPAVDNLIPQSQPPVVHVPALPRNMQSFRWSGGSSSRNSHSSIPIICADRDSVQHEEVGSRNTPRNMLEQPLFVPATDLRSLERNSTIRASSSANLSISGNVASSSRTGSSSVVNPSSASTWVSCPNPPQNPRRLSEYVRRSLFSPGTEAAAGQSNNYSSLRSGPTASSEARIFAADASSQGHNQSHPRSSSWMERQGDAEFGIPYSLRSLAVTGEGSSRIVSELRNVLGLMRRGGSLRFEDVMILDQSVFSGMADIHDRHRDMRLDVDNMSYEELLALEERIGNVSTGLSEETILKLLKQKKYSVETGAQLAAEPCCICQEEYNDGDDMGTLDCGHDYHADCVKQWLKQKNLCPICKTTGLAT 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02231 712 MobiDBLite consensus disorder prediction 228 243 - -
Bach3g02231 712 ProSiteProfiles Zinc finger RING-type profile. 665 706 IPR001841 -
Bach3g02231 712 FunFam E3 ubiquitin-protein ligase MBR2 633 710 - -
Bach3g02231 712 MobiDBLite consensus disorder prediction 141 157 - -
Bach3g02231 712 MobiDBLite consensus disorder prediction 77 243 - -
Bach3g02231 712 MobiDBLite consensus disorder prediction 436 482 - -
Bach3g02231 712 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 214 710 IPR045191 GO:0061630
Bach3g02231 712 MobiDBLite consensus disorder prediction 398 420 - -
Bach3g02231 712 MobiDBLite consensus disorder prediction 436 479 - -
Bach3g02231 712 Pfam Ring finger domain 665 706 IPR001841 -
Bach3g02231 712 SUPERFAMILY RING/U-box 664 708 - -
Bach3g02231 712 MobiDBLite consensus disorder prediction 207 221 - -
Bach3g02231 712 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 628 709 IPR013083 -
Bach3g02231 712 SMART ring_2 665 705 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02231 Bach-Chr3 29231588 29235213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02231 1 712 C3H Transcription Factor Family AT2G15530 34.713 4.08e-90 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02231 - - gmx:100783014 924.85